Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU6-170P-201ENST00000362832 104 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 SNORA1.1-201ENST00000364671 133 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 AC004941.2-201ENST00000427009 228 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 AC011753.1-201ENST00000451001 220 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 RNU6-917P-201ENST00000516294 104 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 RNU6-795P-201ENST00000516323 103 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 RNU6-1018P-201ENST00000516577 106 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 RNU6-521P-201ENST00000516663 105 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 MIR8055-201ENST00000610739 97 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 AC012531.4-201ENST00000616509 177 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 U4.3-201ENST00000621047 82 ntBASIC2.42□□□□□ -2.02
PCDH1Q08174 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDH1Q08174 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 Y_RNA.377-201ENST00000365644 108 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PCDH1Q08174 AL023284.1-201ENST00000403956 276 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 AC096949.1-201ENST00000412047 152 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 RNU7-61P-201ENST00000515897 61 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 AC104984.5-201ENST00000586878 94 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 AC062037.1-201ENST00000605302 128 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 AC008133.2-201ENST00000624540 351 ntBASIC2.41□□□□□ -2.02
PCDH1Q08174 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDH1Q08174 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDH1Q08174 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
PCDH1Q08174 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDH1Q08174 RNU6-1201P-201ENST00000384227 107 ntBASIC2.4□□□□□ -2.03
PCDH1Q08174 SNORA18-201ENST00000384416 132 ntBASIC2.4□□□□□ -2.03
PCDH1Q08174 AC108938.1-201ENST00000451204 136 ntBASIC2.4□□□□□ -2.03
PCDH1Q08174 AC026421.1-201ENST00000519101 163 ntBASIC2.4□□□□□ -2.03
PCDH1Q08174 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.4□□□□□ -2.03
PCDH1Q08174 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDH1Q08174 MIR4764-201ENST00000580680 88 ntBASIC2.4□□□□□ -2.03
PCDH1Q08174 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
PCDH1Q08174 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDH1Q08174 SNORD45B-201ENST00000364617 72 ntBASIC2.39□□□□□ -2.03
PCDH1Q08174 Y_RNA.290-201ENST00000364879 114 ntBASIC2.39□□□□□ -2.03
PCDH1Q08174 RNU6-203P-201ENST00000384038 104 ntBASIC2.39□□□□□ -2.03
PCDH1Q08174 MIR144-201ENST00000384886 86 ntBASIC2.39□□□□□ -2.03
PCDH1Q08174 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
PCDH1Q08174 Z97988.1-201ENST00000637697 135 ntBASIC2.39□□□□□ -2.03
PCDH1Q08174 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH1Q08174 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH1Q08174 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH1Q08174 RNU6-1134P-201ENST00000365156 101 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 Y_RNA.354-201ENST00000365448 111 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 MIR520C-201ENST00000385005 87 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 RNU6-644P-201ENST00000391155 98 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 AL359511.1-201ENST00000402970 211 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 RNA5SP508-201ENST00000411327 119 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 AC245047.7-201ENST00000440265 293 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 AC067747.1-201ENST00000608026 250 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 AL512310.12-203ENST00000640543 90 ntBASIC2.38□□□□□ -2.03
PCDH1Q08174 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDH1Q08174 RNA5SP68-201ENST00000363885 119 ntBASIC2.37□□□□□ -2.03
PCDH1Q08174 MIR450A2-201ENST00000385022 100 ntBASIC2.37□□□□□ -2.03
PCDH1Q08174 RNU2-19P-201ENST00000517288 84 ntBASIC2.37□□□□□ -2.03
PCDH1Q08174 MIR548Z-201ENST00000584743 97 ntBASIC2.37□□□□□ -2.03
PCDH1Q08174 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
PCDH1Q08174 MIR8065-201ENST00000620577 100 ntBASIC2.37□□□□□ -2.03
PCDH1Q08174 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
PCDH1Q08174 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PCDH1Q08174 RNU6-1313P-201ENST00000362622 102 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 RNU6-60P-201ENST00000364792 103 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 RNU6-342P-201ENST00000384521 104 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 MIR194-1-201ENST00000384892 85 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 AC004965.1-201ENST00000413033 213 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 Y_RNA.659-201ENST00000515994 113 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 RN7SKP12-201ENST00000516275 143 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDH1Q08174 DEFB122-202ENST00000569013 197 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH1Q08174 MIR4777-201ENST00000583710 86 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 MIR6895-201ENST00000613497 78 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 AL590808.1-201ENST00000618696 141 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 AC091304.10-201ENST00000641554 121 ntBASIC2.36□□□□□ -2.03
PCDH1Q08174 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH1Q08174 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.35□□□□□ -2.03
PCDH1Q08174 RNU4-82P-201ENST00000362443 140 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 Y_RNA.95-201ENST00000363079 95 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 Y_RNA.96-201ENST00000363092 109 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 SNORD115-35-201ENST00000365122 82 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 RNU6-820P-201ENST00000384273 107 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 MIR1261-201ENST00000408659 82 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 MRPL35P3-201ENST00000421557 364 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 RNU6-322P-201ENST00000516010 103 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 RNU7-2P-201ENST00000516096 62 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 RNU7-35P-201ENST00000517174 62 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 AC096720.1-201ENST00000604441 183 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 MIR6817-201ENST00000615588 66 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 U7.3-201ENST00000616123 62 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 MIR1291-201ENST00000627649 87 ntBASIC2.35□□□□□ -2.03
PCDH1Q08174 MIR524-201ENST00000385242 87 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 MIR653-201ENST00000385279 96 ntBASIC2.34□□□□□ -2.03
PCDH1Q08174 RNU6-602P-201ENST00000411155 105 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms