Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR125B2-201ENST00000385128 89 ntBASIC0.43□□□□□ -2.34
SCN1BQ07699 SNORD12C-201ENST00000386307 89 ntBASIC0.43□□□□□ -2.34
SCN1BQ07699 RNU6-985P-201ENST00000410182 104 ntBASIC0.43□□□□□ -2.34
SCN1BQ07699 RNU2-55P-201ENST00000411146 174 ntBASIC0.43□□□□□ -2.34
SCN1BQ07699 AC008608.1-201ENST00000603910 127 ntBASIC0.43□□□□□ -2.34
SCN1BQ07699 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.43□□□□□ -2.34
SCN1BQ07699 Y_RNA.237-201ENST00000364439 102 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 Y_RNA.304-201ENST00000365011 112 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 SNORA33.2-201ENST00000365413 134 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 Y_RNA.410-201ENST00000383992 113 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN1BQ07699 RNU7-102P-201ENST00000458948 62 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 TRBVB-201ENST00000477100 408 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN1BQ07699 RNA5SP153-201ENST00000516498 76 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 SNORA4-201ENST00000584302 138 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 AP001282.2-201ENST00000616149 309 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
SCN1BQ07699 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SCN1BQ07699 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 Y_RNA.355-201ENST00000365462 98 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-639P-201ENST00000384074 107 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNY3P5-201ENST00000384127 102 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-713P-201ENST00000384761 107 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 MIR613-201ENST00000385248 95 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-1319P-201ENST00000390855 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-747P-201ENST00000390928 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-679P-201ENST00000391003 106 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-241P-201ENST00000391148 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-447P-201ENST00000410293 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-1118P-201ENST00000410382 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-1076P-201ENST00000410397 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-355P-201ENST00000410427 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-791P-201ENST00000410467 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-705P-201ENST00000410601 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-1100P-201ENST00000410691 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-860P-201ENST00000410860 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-651P-201ENST00000411040 105 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-1217P-201ENST00000411276 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-785P-201ENST00000411324 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 SNRPGP8-201ENST00000454064 226 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 RNU6-453P-201ENST00000516819 85 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.41□□□□□ -2.34
SCN1BQ07699 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.41□□□□□ -2.34
SCN1BQ07699 U6.90-201ENST00000614007 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 U2.14-201ENST00000615943 113 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 U6.70-201ENST00000620287 104 ntBASIC0.41□□□□□ -2.34
SCN1BQ07699 MIR302B-201ENST00000362188 73 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 RNU6-797P-201ENST00000363101 109 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 Y_RNA.199-201ENST00000364014 102 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 RNY1-201ENST00000364228 113 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 snoU2_19.4-201ENST00000364329 80 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 MIR563-201ENST00000385080 79 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 RNU6-1228P-201ENST00000391014 107 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 AL606845.1-201ENST00000404881 255 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.4□□□□□ -2.35
SCN1BQ07699 SNORD2.1-201ENST00000458762 69 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 RNU7-156P-201ENST00000517214 74 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 AC090897.1-201ENST00000580909 226 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 AC097639.2-201ENST00000603159 172 ntBASIC0.4□□□□□ -2.35
SCN1BQ07699 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
SCN1BQ07699 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 SNORA1-201ENST00000384107 130 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 RNU6-342P-201ENST00000384521 104 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 MT-TF-201ENST00000387314 71 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 SNORD100-201ENST00000408573 76 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 RNU6-1132P-201ENST00000459214 107 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 RNU7-45P-201ENST00000459460 63 ntBASIC0.39□□□□□ -2.35
SCN1BQ07699 MIR30D-201ENST00000362283 70 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 Y_RNA.23-201ENST00000362496 106 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 MIR216A-201ENST00000385063 110 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 MIR616-201ENST00000385293 97 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 Y_RNA.590-201ENST00000410140 107 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 Y_RNA.701-201ENST00000516812 110 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 SNORD92-201ENST00000585078 85 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 MIR376A2-201ENST00000636782 80 ntBASIC0.38□□□□□ -2.35
SCN1BQ07699 Y_RNA.82-201ENST00000363000 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.92-201ENST00000363043 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.235-201ENST00000364412 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.306-201ENST00000365015 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.312-201ENST00000365089 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.322-201ENST00000365151 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.351-201ENST00000365436 96 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.512-201ENST00000384518 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 RNU6-1109P-201ENST00000391187 107 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 MTCYBP6-201ENST00000441810 138 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.650-201ENST00000459002 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 AC002350.1-201ENST00000490759 375 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.679-201ENST00000516416 91 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.777-201ENST00000516982 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.771-201ENST00000598668 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 Y_RNA.789-201ENST00000622480 102 ntBASIC0.37□□□□□ -2.35
SCN1BQ07699 MIR6717-201ENST00000622747 73 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms