Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
ROM1Q03395 AC007012.1-201ENST00000567192 175 ntBASIC1.77□□□□□ -2.13
ROM1Q03395 RNA5SP48-201ENST00000363969 126 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 Y_RNA.531-201ENST00000384589 121 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 MIR759-201ENST00000390224 91 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 RPS3AP1-201ENST00000413190 320 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 AC090844.1-201ENST00000422019 156 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 MIR3937-201ENST00000580135 106 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 MIR6873-201ENST00000622788 63 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ROM1Q03395 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
ROM1Q03395 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.76□□□□□ -2.13
ROM1Q03395 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ROM1Q03395 ZNF658B-202ENST00000615961 3375 ntBASIC1.76□□□□□ -2.13
ROM1Q03395 SNORA63.4-201ENST00000362763 126 ntBASIC1.75□□□□□ -2.13
ROM1Q03395 SNORA25.3-201ENST00000363205 127 ntBASIC1.75□□□□□ -2.13
ROM1Q03395 Y_RNA.430-201ENST00000384081 110 ntBASIC1.75□□□□□ -2.13
ROM1Q03395 Y_RNA.470-201ENST00000384307 117 ntBASIC1.75□□□□□ -2.13
ROM1Q03395 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.75□□□□□ -2.13
ROM1Q03395 RNU6-893P-201ENST00000458841 100 ntBASIC1.75□□□□□ -2.13
ROM1Q03395 MIR3198-2-201ENST00000577868 80 ntBASIC1.75□□□□□ -2.13
ROM1Q03395 MIR5089-201ENST00000580047 84 ntBASIC1.75□□□□□ -2.13
ROM1Q03395 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
ROM1Q03395 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ROM1Q03395 Z97988.1-201ENST00000637697 135 ntBASIC1.75□□□□□ -2.13
ROM1Q03395 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
ROM1Q03395 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
ROM1Q03395 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ROM1Q03395 Y_RNA.549-201ENST00000384657 102 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 AC019129.1-201ENST00000403786 261 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 MTATP6P29-201ENST00000415057 132 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 AC063976.4-201ENST00000421971 163 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 snoU13.25-201ENST00000458945 104 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 RPS23P4-201ENST00000487908 423 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 AC113410.1-201ENST00000505029 247 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.74□□□□□ -2.13
ROM1Q03395 CYP3A52P-201ENST00000563326 91 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 MIR1273D-201ENST00000577266 86 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 MIR4672-201ENST00000583126 81 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 SNRPGP19-201ENST00000603826 189 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 AL035470.1-201ENST00000622571 220 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 MIR219B-201ENST00000637023 88 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 ZNF355P-201ENST00000427301 3216 ntBASIC1.74□□□□□ -2.13
ROM1Q03395 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
ROM1Q03395 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ROM1Q03395 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ROM1Q03395 RNY4P6-201ENST00000363667 96 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 SNORA22-201ENST00000383907 134 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 Y_RNA.510-201ENST00000384511 114 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 RNU6-1065P-201ENST00000384513 106 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 RNU6-602P-201ENST00000411155 105 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.73□□□□□ -2.13
ROM1Q03395 AC027119.1-201ENST00000440877 241 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 RPL39P39-201ENST00000455840 151 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 MIR3163-201ENST00000581592 73 ntBASIC1.73□□□□□ -2.13
ROM1Q03395 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.73□□□□□ -2.13
ROM1Q03395 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.73□□□□□ -2.13
ROM1Q03395 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
ROM1Q03395 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ROM1Q03395 SNORD33-201ENST00000362761 85 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 Y_RNA.362-201ENST00000365518 110 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 RNA5SP33-201ENST00000516687 98 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 RNU7-6P-201ENST00000516845 62 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 RNA5SP364-201ENST00000516938 78 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 MIR4448-201ENST00000584360 86 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 Y_RNA.783-201ENST00000613546 102 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 MIR8065-201ENST00000620577 100 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.72□□□□□ -2.13
ROM1Q03395 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ROM1Q03395 SNORA63.5-201ENST00000363548 123 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 SNORA64-201ENST00000384674 134 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 MIR548D2-201ENST00000384955 97 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 SNORD12C-201ENST00000386307 89 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 RNA5SP489-201ENST00000410986 109 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.71□□□□□ -2.14
ROM1Q03395 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 AC008413.1-201ENST00000511864 177 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 RNA5SP445-201ENST00000515889 115 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 MIR548AE2-201ENST00000583456 67 ntBASIC1.71□□□□□ -2.14
ROM1Q03395 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
ROM1Q03395 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
ROM1Q03395 SNORD115-2-201ENST00000362842 82 ntBASIC1.7□□□□□ -2.14
ROM1Q03395 SNORD115-20-201ENST00000365099 82 ntBASIC1.7□□□□□ -2.14
ROM1Q03395 Y_RNA.344-201ENST00000365381 112 ntBASIC1.7□□□□□ -2.14
ROM1Q03395 MIR1302-7-201ENST00000408841 72 ntBASIC1.7□□□□□ -2.14
ROM1Q03395 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.7□□□□□ -2.14
ROM1Q03395 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
ROM1Q03395 MIR3664-201ENST00000579074 99 ntBASIC1.7□□□□□ -2.14
ROM1Q03395 AP000942.3-201ENST00000603702 160 ntBASIC1.7□□□□□ -2.14
ROM1Q03395 uc_338.20-201ENST00000621563 178 ntBASIC1.7□□□□□ -2.14
ROM1Q03395 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
ROM1Q03395 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ROM1Q03395 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ROM1Q03395 Y_RNA.281-201ENST00000364774 94 ntBASIC1.69□□□□□ -2.14
ROM1Q03395 SNORA32-201ENST00000384072 121 ntBASIC1.69□□□□□ -2.14
ROM1Q03395 RNU4-69P-201ENST00000410677 143 ntBASIC1.69□□□□□ -2.14
ROM1Q03395 RPS27P16-201ENST00000425758 201 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms