Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 MIR1-2-201ENST00000384961 85 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AC009961.2-201ENST00000435771 251 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AC116353.3-201ENST00000511215 249 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 RNU7-79P-201ENST00000516082 62 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AC127455.1-201ENST00000565496 145 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AL133215.3-201ENST00000609801 448 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 MIR8068-201ENST00000618032 68 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AL121895.2-201ENST00000619558 447 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AC091931.1-201ENST00000623488 728 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 AC022140.2-201ENST00000623500 188 ntBASIC-0.66□□□□□ -2.52
HSPG2P98160 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 RNU6-83P-201ENST00000384568 112 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 AC104850.1-201ENST00000435940 476 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.67□□□□□ -2.52
HSPG2P98160 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 RNU4-80P-201ENST00000363200 141 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 SNORD114-4-201ENST00000363962 75 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 RNU6-454P-201ENST00000364292 107 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 SNORA20-201ENST00000384662 132 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 SNORD115-47-201ENST00000391226 86 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 SNORD11-201ENST00000459124 84 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.67□□□□□ -2.52
HSPG2P98160 AC022878.1-201ENST00000530684 149 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 MIR5583-1-201ENST00000580941 59 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 MIR5188-201ENST00000583467 113 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 AC145423.2-201ENST00000610631 239 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
HSPG2P98160 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 RNU6-164P-201ENST00000364604 103 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 MIR539-201ENST00000365690 78 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 RNU6-809P-201ENST00000384461 107 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 MIR507-201ENST00000385234 94 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 EIF1P2-201ENST00000428233 350 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 GPR143P-201ENST00000434155 205 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.67□□□□□ -2.52
HSPG2P98160 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 AL163152.1-201ENST00000642001 374 ntBASIC-0.67□□□□□ -2.52
HSPG2P98160 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 AC018638.8-201ENST00000588755 281 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-501P-201ENST00000364072 100 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 MIR548A2-201ENST00000384956 97 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 MIR519A1-201ENST00000385257 85 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 AC141846.1-201ENST00000568348 142 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 MIR3139-201ENST00000579145 76 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 SNORD115-33-201ENST00000363723 82 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 MIR548AE1-201ENST00000583292 70 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 AL357078.3-201ENST00000607528 618 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-228P-201ENST00000362700 106 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-82P-201ENST00000363970 107 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-597P-201ENST00000365620 102 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 SNORD116-12-201ENST00000384468 92 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-606P-201ENST00000384721 111 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-159P-201ENST00000391080 106 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-337P-201ENST00000391243 106 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-334P-201ENST00000517072 102 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU7-35P-201ENST00000517174 62 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.68□□□□□ -2.52
HSPG2P98160 Z84480.1-201ENST00000605131 311 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 MIR548AY-201ENST00000617669 107 ntBASIC-0.68□□□□□ -2.52
HSPG2P98160 RNU6-476P-201ENST00000384726 107 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 AL606923.1-201ENST00000406616 190 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 AC023449.1-201ENST00000454464 154 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 MIR5692C1-201ENST00000585309 91 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 AC027449.1-201ENST00000608890 407 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 SNORD50.1-201ENST00000362987 71 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 SNORA62.4-201ENST00000365504 151 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 MIR8485-201ENST00000401372 91 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 RNU6-592P-201ENST00000411333 103 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 MTATP6P20-201ENST00000414147 562 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 MTCYBP8-201ENST00000422855 651 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 AL365203.2-201ENST00000423444 196 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.69□□□□□ -2.52
HSPG2P98160 SNORD36C-201ENST00000516733 66 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 MIR4662B-201ENST00000579498 81 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 U4.1-201ENST00000620349 87 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 SNORA18-201ENST00000384416 132 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 RNU6-790P-201ENST00000384479 105 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 AL078595.1-201ENST00000404458 226 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 MIR1278-201ENST00000408753 81 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 AL353813.1-201ENST00000440700 253 ntBASIC-0.69□□□□□ -2.52
HSPG2P98160 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.69□□□□□ -2.52
HSPG2P98160 SNORD113-7-201ENST00000363762 77 ntBASIC-0.7□□□□□ -2.52
HSPG2P98160 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms