Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 SNORD114-17-201ENST00000364699 75 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 RNU6-831P-201ENST00000384548 107 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 MIR889-201ENST00000401280 79 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.62□□□□□ -2.67
RPS28P62857 RNU6-261P-201ENST00000459506 102 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 MIR5701-3-201ENST00000578890 82 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 MIR5701-1-201ENST00000585138 82 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 AC060780.3-201ENST00000589464 80 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 AC022441.3-201ENST00000605737 136 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.62□□□□□ -2.67
RPS28P62857 MIR5701-2-201ENST00000615634 82 ntBASIC-1.62□□□□□ -2.67
RPS28P62857 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.63□□□□□ -2.67
RPS28P62857 RNU6-476P-201ENST00000384726 107 ntBASIC-1.63□□□□□ -2.67
RPS28P62857 SNORA26.6-201ENST00000391256 115 ntBASIC-1.63□□□□□ -2.67
RPS28P62857 AL590004.1-201ENST00000405321 300 ntBASIC-1.63□□□□□ -2.67
RPS28P62857 AC093423.1-201ENST00000440817 142 ntBASIC-1.63□□□□□ -2.67
RPS28P62857 MIR4520-1-201ENST00000582609 70 ntBASIC-1.63□□□□□ -2.67
RPS28P62857 AC087752.4-201ENST00000605911 462 ntBASIC-1.63□□□□□ -2.67
RPS28P62857 MIR20A-201ENST00000362279 71 ntBASIC-1.64□□□□□ -2.67
RPS28P62857 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.64□□□□□ -2.67
RPS28P62857 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.64□□□□□ -2.67
RPS28P62857 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.64□□□□□ -2.67
RPS28P62857 MIR527-201ENST00000385244 85 ntBASIC-1.64□□□□□ -2.67
RPS28P62857 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.64□□□□□ -2.67
RPS28P62857 AC098826.2-201ENST00000452011 651 ntBASIC-1.64□□□□□ -2.67
RPS28P62857 RNU7-45P-201ENST00000459460 63 ntBASIC-1.64□□□□□ -2.67
RPS28P62857 AL442663.2-201ENST00000554385 511 ntBASIC-1.64□□□□□ -2.67
RPS28P62857 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 RNU4-50P-201ENST00000364361 141 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 RNU6-588P-201ENST00000410281 105 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 SNORD18.2-201ENST00000459604 70 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 MTND3P7-201ENST00000474435 343 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 AC107027.2-201ENST00000512197 115 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 RNU6-256P-201ENST00000516747 97 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 RNU6-89P-201ENST00000606519 100 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 AC027449.1-201ENST00000608890 407 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 MIR1246-201ENST00000636535 73 ntBASIC-1.65□□□□□ -2.67
RPS28P62857 RNA5SP133-201ENST00000363368 119 ntBASIC-1.66□□□□□ -2.68
RPS28P62857 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.66□□□□□ -2.68
RPS28P62857 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.66□□□□□ -2.68
RPS28P62857 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.66□□□□□ -2.68
RPS28P62857 SNORA36B-201ENST00000410438 131 ntBASIC-1.66□□□□□ -2.68
RPS28P62857 AC083798.1-201ENST00000472671 131 ntBASIC-1.66□□□□□ -2.68
RPS28P62857 RNU7-149P-201ENST00000516739 59 ntBASIC-1.66□□□□□ -2.68
RPS28P62857 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.66□□□□□ -2.68
RPS28P62857 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.67□□□□□ -2.68
RPS28P62857 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.67□□□□□ -2.68
RPS28P62857 RNU7-74P-201ENST00000459104 62 ntBASIC-1.67□□□□□ -2.68
RPS28P62857 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.67□□□□□ -2.68
RPS28P62857 AC024933.1-201ENST00000608472 348 ntBASIC-1.67□□□□□ -2.68
RPS28P62857 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.68□□□□□ -2.68
RPS28P62857 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.68□□□□□ -2.68
RPS28P62857 AC244090.1-201ENST00000441884 93 ntBASIC-1.68□□□□□ -2.68
RPS28P62857 RNU6-232P-201ENST00000517144 64 ntBASIC-1.68□□□□□ -2.68
RPS28P62857 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.68□□□□□ -2.68
RPS28P62857 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.68□□□□□ -2.68
RPS28P62857 AC040904.1-201ENST00000590850 223 ntBASIC-1.68□□□□□ -2.68
RPS28P62857 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
RPS28P62857 AF228730.4-201ENST00000421457 183 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 AC024067.1-201ENST00000426199 223 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 RNU6-693P-201ENST00000516134 107 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 AC060788.1-201ENST00000521318 469 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 MTND5P40-201ENST00000559945 246 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 MIR548H5-201ENST00000580314 60 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 MIR548AG2-201ENST00000581228 64 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 MIR6502-201ENST00000617296 76 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 AC022140.2-201ENST00000623500 188 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 AC079248.2-201ENST00000623779 326 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 U6.109-201ENST00000636749 87 ntBASIC-1.69□□□□□ -2.68
RPS28P62857 MIR409-201ENST00000362237 79 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 RNU6-553P-201ENST00000364047 96 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 RNY1P13-201ENST00000365030 105 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 MIR29B1-201ENST00000385015 81 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.7□□□□□ -2.68
RPS28P62857 RNU7-125P-201ENST00000458760 62 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 RNU2-31P-201ENST00000516954 155 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 MIR2355-201ENST00000517199 87 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 YWHAEP3-201ENST00000582767 121 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 MIR7111-201ENST00000619751 72 ntBASIC-1.7□□□□□ -2.68
RPS28P62857 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.71□□□□□ -2.68
RPS28P62857 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.71□□□□□ -2.68
RPS28P62857 SNORA18-201ENST00000384416 132 ntBASIC-1.71□□□□□ -2.68
RPS28P62857 MIR599-201ENST00000385069 95 ntBASIC-1.71□□□□□ -2.68
RPS28P62857 MIR519E-201ENST00000385075 84 ntBASIC-1.71□□□□□ -2.68
RPS28P62857 RNU1-54P-201ENST00000517181 120 ntBASIC-1.71□□□□□ -2.68
RPS28P62857 AC005014.2-201ENST00000607795 599 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms