Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC008267.6-201ENST00000441664 139 ntBASIC1.39□□□□□ -2.19
SEC61A1P61619 RNU2-11P-201ENST00000459191 187 ntBASIC1.39□□□□□ -2.19
SEC61A1P61619 RNA5SP458-201ENST00000516188 119 ntBASIC1.39□□□□□ -2.19
SEC61A1P61619 AC133485.4-201ENST00000561835 220 ntBASIC1.39□□□□□ -2.19
SEC61A1P61619 AC138907.4-201ENST00000570107 226 ntBASIC1.39□□□□□ -2.19
SEC61A1P61619 SNORD115-40-201ENST00000606510 82 ntBASIC1.39□□□□□ -2.19
SEC61A1P61619 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
SEC61A1P61619 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.38□□□□□ -2.19
SEC61A1P61619 SNORA1.2-201ENST00000365189 134 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 RNU6-690P-201ENST00000365242 106 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 RPS27P16-201ENST00000425758 201 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 AC107297.1-201ENST00000459991 176 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 RNU6-998P-201ENST00000515894 101 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 RNU6-772P-201ENST00000516042 105 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 RNU6-479P-201ENST00000516348 105 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 RNU6-659P-201ENST00000516454 104 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 MIR4255-201ENST00000579351 72 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 MIR4791-201ENST00000607666 84 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.38□□□□□ -2.19
SEC61A1P61619 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.38□□□□□ -2.19
SEC61A1P61619 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SEC61A1P61619 MIR302B-201ENST00000362188 73 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 RNU6-349P-201ENST00000362402 107 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 MIR520C-201ENST00000385005 87 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 MIR653-201ENST00000385279 96 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 SNORD41-201ENST00000386967 70 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 AL451046.2-201ENST00000403074 277 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 MIR1263-201ENST00000408324 86 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 RNU7-80P-201ENST00000459562 61 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 RN7SKP19-201ENST00000516016 252 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 AC090049.2-201ENST00000550377 109 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.37□□□□□ -2.19
SEC61A1P61619 MIR548AI-201ENST00000579940 88 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 MIR4764-201ENST00000580680 88 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 MIR4303-201ENST00000581299 66 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 AP000942.3-201ENST00000603702 160 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 AC243994.1-201ENST00000618627 109 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.37□□□□□ -2.19
SEC61A1P61619 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.36□□□□□ -2.19
SEC61A1P61619 RNU6-1290P-201ENST00000362957 109 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 RNU6-1190P-201ENST00000410811 104 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 AL035398.1-201ENST00000430869 322 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 RNU7-96P-201ENST00000459535 64 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 AC079140.2-201ENST00000506193 142 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 RNU7-41P-201ENST00000515917 61 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 RNU6-322P-201ENST00000516010 103 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 RNU6-947P-201ENST00000516264 106 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 MIR4285-201ENST00000581001 85 ntBASIC1.36□□□□□ -2.19
SEC61A1P61619 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.36□□□□□ -2.19
SEC61A1P61619 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SEC61A1P61619 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SEC61A1P61619 RNU6-647P-201ENST00000364243 107 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 SNORD58C-201ENST00000365223 64 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 RNY1P6-201ENST00000384193 109 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 Y_RNA.454-201ENST00000384224 113 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 SNORA51.10-201ENST00000384418 136 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 RNU6-1081P-201ENST00000384537 107 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 RNU6-913P-201ENST00000390913 95 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 HMGN1P33-201ENST00000432945 451 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 AC027119.1-201ENST00000440877 241 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 RNU2-13P-201ENST00000515909 113 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 AL137067.1-201ENST00000615933 120 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 AC008133.2-201ENST00000624540 351 ntBASIC1.35□□□□□ -2.19
SEC61A1P61619 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
SEC61A1P61619 MIR934-201ENST00000401241 83 ntBASIC1.34□□□□□ -2.19
SEC61A1P61619 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
SEC61A1P61619 RNU6-735P-201ENST00000410612 107 ntBASIC1.34□□□□□ -2.19
SEC61A1P61619 Y_RNA.617-201ENST00000410920 90 ntBASIC1.34□□□□□ -2.19
SEC61A1P61619 SNORD111.1-201ENST00000516421 86 ntBASIC1.34□□□□□ -2.19
SEC61A1P61619 AL359881.1-201ENST00000602916 267 ntBASIC1.34□□□□□ -2.19
SEC61A1P61619 AC021443.1-201ENST00000604478 211 ntBASIC1.34□□□□□ -2.19
SEC61A1P61619 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SEC61A1P61619 AL391516.1-201ENST00000554380 2449 ntBASIC1.34□□□□□ -2.2
SEC61A1P61619 RNA5SP205-201ENST00000364653 136 ntBASIC1.33□□□□□ -2.2
SEC61A1P61619 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
SEC61A1P61619 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.33□□□□□ -2.2
SEC61A1P61619 RNU7-43P-201ENST00000516554 64 ntBASIC1.33□□□□□ -2.2
SEC61A1P61619 MIR3192-201ENST00000584920 77 ntBASIC1.33□□□□□ -2.2
SEC61A1P61619 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
SEC61A1P61619 AL096861.1-201ENST00000610899 123 ntBASIC1.33□□□□□ -2.2
SEC61A1P61619 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
SEC61A1P61619 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 SNORA70.7-201ENST00000384159 133 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 Y_RNA.537-201ENST00000384626 109 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 RNA5SP445-201ENST00000515889 115 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 SNORD33.1-201ENST00000516213 88 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 RNU2-35P-201ENST00000516446 142 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 RNU6-113P-201ENST00000516653 101 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 AL513534.2-201ENST00000603836 250 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 AC021613.1-201ENST00000623880 111 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 MIR3914-2-201ENST00000637339 95 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 WWP1P1-201ENST00000466609 2769 ntBASIC1.32□□□□□ -2.2
SEC61A1P61619 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SEC61A1P61619 SNORA25.3-201ENST00000363205 127 ntBASIC1.31□□□□□ -2.2
SEC61A1P61619 SNORA24-201ENST00000384096 131 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms