Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.98□□□□□ -2.25
RPS3AP61247 RNA5SP255-201ENST00000516370 107 ntBASIC0.98□□□□□ -2.25
RPS3AP61247 MIR377-201ENST00000362145 69 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 Y_RNA.410-201ENST00000383992 113 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 RNU6-643P-201ENST00000384018 107 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 SNORA2B-201ENST00000384583 137 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 RNU6-913P-201ENST00000390913 95 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 SNORA79-201ENST00000408376 140 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 AC090844.1-201ENST00000422019 156 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 RNU7-73P-201ENST00000458743 63 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 RNU7-53P-201ENST00000516705 60 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 MIR3129-201ENST00000581095 76 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
RPS3AP61247 Z83818.1-201ENST00000603584 150 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 AC141273.2-201ENST00000618989 130 ntBASIC0.97□□□□□ -2.25
RPS3AP61247 Y_RNA.75-201ENST00000362927 97 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 Y_RNA.168-201ENST00000363740 102 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 Y_RNA.440-201ENST00000384120 114 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 RNA5SP95-201ENST00000410319 137 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 RPS3AP1-201ENST00000413190 320 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.96□□□□□ -2.26
RPS3AP61247 AC067940.1-201ENST00000458411 300 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 U7.7-201ENST00000459276 60 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 RPS29P24-201ENST00000486345 171 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 RNU6-1219P-201ENST00000516143 112 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 RNU6-958P-201ENST00000516995 106 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 AL365205.2-201ENST00000594586 68 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 AP000753.3-201ENST00000604083 169 ntBASIC0.96□□□□□ -2.26
RPS3AP61247 Y_RNA.297-201ENST00000364950 91 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 SNORA25.9-201ENST00000365087 128 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 RNU6-1189P-201ENST00000383958 107 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 RNU6-125P-201ENST00000384505 107 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 RNU6-994P-201ENST00000410507 111 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS3AP61247 RNU6-138P-201ENST00000515952 107 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 MIR4264-201ENST00000583520 66 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 MIR5197-201ENST00000583721 112 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 RNU6-94P-201ENST00000607728 107 ntBASIC0.95□□□□□ -2.26
RPS3AP61247 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RPS3AP61247 RNU6-1020P-201ENST00000363684 107 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 Y_RNA.476-201ENST00000384347 108 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RPS3AP61247 RNU6-1190P-201ENST00000410811 104 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.94□□□□□ -2.26
RPS3AP61247 AL138752.1-201ENST00000452964 351 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 RNU7-96P-201ENST00000459535 64 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 RNU6-1110P-201ENST00000516462 101 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 MRPS18CP4-201ENST00000535821 231 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 MIR378D2-201ENST00000580636 98 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 MIR8070-201ENST00000616510 88 ntBASIC0.94□□□□□ -2.26
RPS3AP61247 Y_RNA.233-201ENST00000364407 101 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 RNU6-580P-201ENST00000365159 107 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 RNU6-1336P-201ENST00000383886 109 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 Y_RNA.542-201ENST00000384641 111 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 AL035398.1-201ENST00000430869 322 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 HMGN1P33-201ENST00000432945 451 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 Y_RNA.644-201ENST00000459006 113 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 RNU6-998P-201ENST00000515894 101 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 Y_RNA.674-201ENST00000516362 113 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 RNA5SP102-201ENST00000516865 106 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 AC025627.3-201ENST00000582078 182 ntBASIC0.93□□□□□ -2.26
RPS3AP61247 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
RPS3AP61247 RNU6-200P-201ENST00000364743 107 ntBASIC0.92□□□□□ -2.26
RPS3AP61247 Y_RNA.552-201ENST00000384665 112 ntBASIC0.92□□□□□ -2.26
RPS3AP61247 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
RPS3AP61247 SNORD116-25-201ENST00000516517 92 ntBASIC0.92□□□□□ -2.26
RPS3AP61247 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
RPS3AP61247 MIR8055-201ENST00000610739 97 ntBASIC0.92□□□□□ -2.26
RPS3AP61247 RNU6-1292P-201ENST00000383856 107 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 Y_RNA.515-201ENST00000384535 112 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 RNU5E-9P-201ENST00000411164 104 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 RNU2-64P-201ENST00000411315 191 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 AC006461.1-201ENST00000412637 326 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 RNU2-11P-201ENST00000459191 187 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.91□□□□□ -2.26
RPS3AP61247 MIR4431-201ENST00000579990 94 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 Z97988.1-201ENST00000637697 135 ntBASIC0.91□□□□□ -2.26
RPS3AP61247 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 Y_RNA.257-201ENST00000364596 102 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 SNORD38B-201ENST00000384690 67 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 MIR499A-201ENST00000384903 122 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 SNORD89-201ENST00000390981 114 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 MIR1276-201ENST00000408707 83 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 AC244023.1-201ENST00000426884 112 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 SEPT7P4-201ENST00000437076 306 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 AC242498.1-201ENST00000604134 111 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 MIR6504-201ENST00000613520 61 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 SNORD38B-202ENST00000625943 69 ntBASIC0.9□□□□□ -2.27
RPS3AP61247 SNORA26.6-201ENST00000391256 115 ntBASIC0.89□□□□□ -2.27
RPS3AP61247 MIR548I3-201ENST00000408378 149 ntBASIC0.89□□□□□ -2.27
RPS3AP61247 MIR1827-201ENST00000408549 66 ntBASIC0.89□□□□□ -2.27
RPS3AP61247 RNU7-45P-201ENST00000459460 63 ntBASIC0.89□□□□□ -2.27
RPS3AP61247 SCARNA15-202ENST00000516881 127 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 298.2 ms