Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC108210.2-201ENST00000503681 201 ntBASIC1.38□□□□□ -2.19
SUMO3P55854 SNORD79.1-201ENST00000516069 84 ntBASIC1.38□□□□□ -2.19
SUMO3P55854 MIR3152-201ENST00000579801 74 ntBASIC1.38□□□□□ -2.19
SUMO3P55854 AL022345.2-201ENST00000606307 135 ntBASIC1.38□□□□□ -2.19
SUMO3P55854 SEPT14P17-201ENST00000617978 177 ntBASIC1.38□□□□□ -2.19
SUMO3P55854 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SUMO3P55854 RNY1P11-201ENST00000363759 113 ntBASIC1.37□□□□□ -2.19
SUMO3P55854 SNORA1.1-201ENST00000364671 133 ntBASIC1.37□□□□□ -2.19
SUMO3P55854 RNA5SP363-201ENST00000365072 115 ntBASIC1.37□□□□□ -2.19
SUMO3P55854 SNORA25-201ENST00000384384 134 ntBASIC1.37□□□□□ -2.19
SUMO3P55854 MIR764-201ENST00000390811 85 ntBASIC1.37□□□□□ -2.19
SUMO3P55854 MIR2115-201ENST00000516657 100 ntBASIC1.37□□□□□ -2.19
SUMO3P55854 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.37□□□□□ -2.19
SUMO3P55854 RNU6-1319P-201ENST00000390855 104 ntBASIC1.36□□□□□ -2.19
SUMO3P55854 RNU6-747P-201ENST00000390928 104 ntBASIC1.36□□□□□ -2.19
SUMO3P55854 RNU6-241P-201ENST00000391148 104 ntBASIC1.36□□□□□ -2.19
SUMO3P55854 RNU6-177P-201ENST00000411257 104 ntBASIC1.36□□□□□ -2.19
SUMO3P55854 RNU7-21P-201ENST00000459430 62 ntBASIC1.36□□□□□ -2.19
SUMO3P55854 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
SUMO3P55854 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.36□□□□□ -2.19
SUMO3P55854 RNU2-60P-201ENST00000517290 128 ntBASIC1.36□□□□□ -2.19
SUMO3P55854 MIR6717-201ENST00000622747 73 ntBASIC1.36□□□□□ -2.19
SUMO3P55854 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 Y_RNA.488-201ENST00000384403 102 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 SNORD38B-201ENST00000384690 67 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 MT-TN-201ENST00000387400 73 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SUMO3P55854 SNORA75.2-201ENST00000391138 150 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 SNORA75.3-201ENST00000391231 150 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 SNORA26.6-201ENST00000391256 115 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 AL603914.1-201ENST00000401964 204 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 MIR1323-201ENST00000408090 73 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 RNU6-613P-201ENST00000410412 108 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.35□□□□□ -2.19
SUMO3P55854 AC015712.3-201ENST00000559380 164 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.35□□□□□ -2.19
SUMO3P55854 AC011603.4-201ENST00000611325 277 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 SNORD38B-202ENST00000625943 69 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
SUMO3P55854 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 RNU1-17P-201ENST00000363022 152 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 Y_RNA.430-201ENST00000384081 110 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 RNY1P6-201ENST00000384193 109 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 Y_RNA.506-201ENST00000384494 102 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 MIR569-201ENST00000385228 96 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 SNORA25.12-201ENST00000516202 82 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 RNU6-113P-201ENST00000516653 101 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 AC104984.5-201ENST00000586878 94 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 AP001340.1-201ENST00000624405 217 ntBASIC1.34□□□□□ -2.19
SUMO3P55854 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 RNU6-349P-201ENST00000362402 107 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 Y_RNA.354-201ENST00000365448 111 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 SNORA20-201ENST00000384662 132 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 AC090844.1-201ENST00000422019 156 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 HMGN1P33-201ENST00000432945 451 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.33□□□□□ -2.2
SUMO3P55854 RNU7-90P-201ENST00000459216 62 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 RNU7-45P-201ENST00000459460 63 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 AC021613.1-201ENST00000623880 111 ntBASIC1.33□□□□□ -2.2
SUMO3P55854 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 RNU6-125P-201ENST00000384505 107 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 RNU6-460P-201ENST00000391158 108 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 RNU6-1190P-201ENST00000410811 104 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 RNU6-602P-201ENST00000411155 105 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 MRPL35P3-201ENST00000421557 364 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 RNU6-893P-201ENST00000458841 100 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 Y_RNA.690-201ENST00000516603 95 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 AP000753.3-201ENST00000604083 169 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 MIR6715A-201ENST00000615929 79 ntBASIC1.32□□□□□ -2.2
SUMO3P55854 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SUMO3P55854 MIR377-201ENST00000362145 69 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 Y_RNA.330-201ENST00000365230 109 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 Y_RNA.343-201ENST00000365354 112 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 AC244023.1-201ENST00000426884 112 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 Y_RNA.686-201ENST00000516548 134 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 MIR4264-201ENST00000583520 66 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 AC242498.1-201ENST00000604134 111 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 AL645939.4-201ENST00000604495 135 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 AL353997.5-201ENST00000618886 171 ntBASIC1.31□□□□□ -2.2
SUMO3P55854 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
SUMO3P55854 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SUMO3P55854 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SUMO3P55854 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SUMO3P55854 RNU6-309P-201ENST00000364573 106 ntBASIC1.3□□□□□ -2.2
SUMO3P55854 RNU6-915P-201ENST00000364943 103 ntBASIC1.3□□□□□ -2.2
SUMO3P55854 RNU6-482P-201ENST00000391068 107 ntBASIC1.3□□□□□ -2.2
SUMO3P55854 AC063976.4-201ENST00000421971 163 ntBASIC1.3□□□□□ -2.2
SUMO3P55854 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.3□□□□□ -2.2
SUMO3P55854 Y_RNA.692-201ENST00000516627 105 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms