Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNU6-1067P-201ENST00000384752 107 ntBASIC1.19□□□□□ -2.22
CLCNKAP51800 SNORD37.2-201ENST00000391075 66 ntBASIC1.19□□□□□ -2.22
CLCNKAP51800 RNU6-588P-201ENST00000410281 105 ntBASIC1.19□□□□□ -2.22
CLCNKAP51800 RNU6-394P-201ENST00000410735 107 ntBASIC1.19□□□□□ -2.22
CLCNKAP51800 DNAJC19P2-201ENST00000593340 302 ntBASIC1.19□□□□□ -2.22
CLCNKAP51800 MIR6844-201ENST00000637122 62 ntBASIC1.19□□□□□ -2.22
CLCNKAP51800 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 Y_RNA.180-201ENST00000363867 113 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 Y_RNA.363-201ENST00000365529 113 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 Y_RNA.398-201ENST00000383952 99 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 SNORA24-201ENST00000384096 131 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 RNU6-209P-201ENST00000384118 107 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 SNORA75.5-201ENST00000391291 81 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 RNU6-1149P-201ENST00000516810 97 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 MIR3144-201ENST00000579460 79 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 MIR548AO-201ENST00000579992 96 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 AC021753.1-201ENST00000635724 168 ntBASIC1.18□□□□□ -2.22
CLCNKAP51800 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CLCNKAP51800 MIR103A2-201ENST00000362154 78 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 RNA5SP264-201ENST00000363115 107 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 RNU4-11P-201ENST00000365287 132 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 Y_RNA.351-201ENST00000365436 96 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 RNU6-913P-201ENST00000390913 95 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 MIR1185-1-201ENST00000408598 86 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 MIR1302-7-201ENST00000408841 72 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 RNU6-998P-201ENST00000515894 101 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 SCARNA15-202ENST00000516881 127 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 MTND5P41-201ENST00000517498 206 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 AC091895.1-201ENST00000624494 256 ntBASIC1.17□□□□□ -2.22
CLCNKAP51800 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLCNKAP51800 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.16□□□□□ -2.22
CLCNKAP51800 Y_RNA.52-201ENST00000362760 96 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 RNU6-151P-201ENST00000364158 107 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 RNU6-53P-201ENST00000365367 106 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 RNU6-449P-201ENST00000383914 107 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 MIR548I3-201ENST00000408378 149 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 MIR548I1-201ENST00000408810 149 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 AL035398.1-201ENST00000430869 322 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 RNU2-11P-201ENST00000459191 187 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 RNU7-96P-201ENST00000459535 64 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 SNORA31.4-201ENST00000516049 129 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 AP003716.2-201ENST00000528260 108 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 MIR3646-201ENST00000578301 84 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 MTND5P32-201ENST00000560711 1802 ntBASIC1.16□□□□□ -2.22
CLCNKAP51800 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 Y_RNA.497-201ENST00000384447 98 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 Y_RNA.580-201ENST00000391004 95 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 SNORA75.2-201ENST00000391138 150 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 SNORA75.3-201ENST00000391231 150 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 RNU6-1190P-201ENST00000410811 104 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 HMGN1P33-201ENST00000432945 451 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 RNU7-53P-201ENST00000516705 60 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 PRELID3BP2-201ENST00000605362 201 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 Y_RNA.778-201ENST00000620203 90 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 AC091932.4-201ENST00000623386 200 ntBASIC1.15□□□□□ -2.23
CLCNKAP51800 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CLCNKAP51800 AL596211.1-201ENST00000569873 2277 ntBASIC1.14□□□□□ -2.23
CLCNKAP51800 AC090844.1-201ENST00000422019 156 ntBASIC1.14□□□□□ -2.23
CLCNKAP51800 RNU7-73P-201ENST00000458743 63 ntBASIC1.14□□□□□ -2.23
CLCNKAP51800 snoU13.16-201ENST00000459350 104 ntBASIC1.14□□□□□ -2.23
CLCNKAP51800 RNU7-45P-201ENST00000459460 63 ntBASIC1.14□□□□□ -2.23
CLCNKAP51800 Y_RNA.676-201ENST00000516393 96 ntBASIC1.14□□□□□ -2.23
CLCNKAP51800 AL022345.2-201ENST00000606307 135 ntBASIC1.14□□□□□ -2.23
CLCNKAP51800 Y_RNA.464-201ENST00000384282 110 ntBASIC1.13□□□□□ -2.23
CLCNKAP51800 AL392103.1-201ENST00000447000 198 ntBASIC1.13□□□□□ -2.23
CLCNKAP51800 RNU6-255P-201ENST00000516957 105 ntBASIC1.13□□□□□ -2.23
CLCNKAP51800 SNORA70.22-201ENST00000517160 124 ntBASIC1.13□□□□□ -2.23
CLCNKAP51800 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.13□□□□□ -2.23
CLCNKAP51800 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.13□□□□□ -2.23
CLCNKAP51800 AC112693.2-201ENST00000556538 232 ntBASIC1.13□□□□□ -2.23
CLCNKAP51800 AC131055.1-201ENST00000584626 316 ntBASIC1.13□□□□□ -2.23
CLCNKAP51800 MIR302B-201ENST00000362188 73 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 Y_RNA.170-201ENST00000363746 110 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 RNU6-654P-201ENST00000364373 107 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 Y_RNA.330-201ENST00000365230 109 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 RNU7-80P-201ENST00000459562 61 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 SNORD79.1-201ENST00000516069 84 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 RNU2-60P-201ENST00000517290 128 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.12□□□□□ -2.23
CLCNKAP51800 HSPE1P19-201ENST00000603327 295 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 AL020996.3-201ENST00000606617 222 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 AC012676.2-201ENST00000619258 186 ntBASIC1.12□□□□□ -2.23
CLCNKAP51800 RNU1-133P-201ENST00000364867 167 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 RNA5SP95-201ENST00000410319 137 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 RNA5SP236-201ENST00000516169 116 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 SNORA25.12-201ENST00000516202 82 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 RNU7-70P-201ENST00000516941 66 ntBASIC1.11□□□□□ -2.23
CLCNKAP51800 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms