Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-1201P-201ENST00000384227 107 ntBASIC2.59□□□□□ -1.99
USP11P51784 MIR597-201ENST00000384968 97 ntBASIC2.59□□□□□ -1.99
USP11P51784 RNU7-12P-201ENST00000516030 62 ntBASIC2.59□□□□□ -1.99
USP11P51784 RNU6-521P-201ENST00000516663 105 ntBASIC2.59□□□□□ -1.99
USP11P51784 RNU6-958P-201ENST00000516995 106 ntBASIC2.59□□□□□ -1.99
USP11P51784 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP11P51784 ZNF658B-202ENST00000615961 3375 ntBASIC2.58□□□□□ -2
USP11P51784 SNORA22.1-201ENST00000362701 134 ntBASIC2.58□□□□□ -2
USP11P51784 Y_RNA.370-201ENST00000365589 108 ntBASIC2.58□□□□□ -2
USP11P51784 Y_RNA.377-201ENST00000365644 108 ntBASIC2.58□□□□□ -2
USP11P51784 Y_RNA.467-201ENST00000384297 102 ntBASIC2.58□□□□□ -2
USP11P51784 RNU6-972P-201ENST00000391208 107 ntBASIC2.58□□□□□ -2
USP11P51784 AL034345.1-201ENST00000407768 123 ntBASIC2.58□□□□□ -2
USP11P51784 SNORA3.2-201ENST00000408221 125 ntBASIC2.58□□□□□ -2
USP11P51784 AL356320.1-201ENST00000429616 163 ntBASIC2.58□□□□□ -2
USP11P51784 AC093850.1-201ENST00000454121 251 ntBASIC2.58□□□□□ -2
USP11P51784 RPL39P39-201ENST00000455840 151 ntBASIC2.58□□□□□ -2
USP11P51784 SCARNA16.3-201ENST00000516595 184 ntBASIC2.58□□□□□ -2
USP11P51784 RNA5SP33-201ENST00000516687 98 ntBASIC2.58□□□□□ -2
USP11P51784 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.58□□□□□ -2
USP11P51784 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP11P51784 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.57□□□□□ -2
USP11P51784 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.57□□□□□ -2
USP11P51784 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.57□□□□□ -2
USP11P51784 Y_RNA.95-201ENST00000363079 95 ntBASIC2.57□□□□□ -2
USP11P51784 RNU1-51P-201ENST00000365345 176 ntBASIC2.57□□□□□ -2
USP11P51784 RNU6-787P-201ENST00000384032 107 ntBASIC2.57□□□□□ -2
USP11P51784 SNORA24-201ENST00000384096 131 ntBASIC2.57□□□□□ -2
USP11P51784 RNU6-675P-201ENST00000384236 104 ntBASIC2.57□□□□□ -2
USP11P51784 SNORA18-201ENST00000384416 132 ntBASIC2.57□□□□□ -2
USP11P51784 RNU6-1031P-201ENST00000384773 107 ntBASIC2.57□□□□□ -2
USP11P51784 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.57□□□□□ -2
USP11P51784 RNU6-913P-201ENST00000390913 95 ntBASIC2.57□□□□□ -2
USP11P51784 SNORD28B-201ENST00000390993 75 ntBASIC2.57□□□□□ -2
USP11P51784 MIR1255A-201ENST00000408338 113 ntBASIC2.57□□□□□ -2
USP11P51784 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.57□□□□□ -2
USP11P51784 IGLL4P-201ENST00000614590 133 ntBASIC2.57□□□□□ -2
USP11P51784 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.57□□□□□ -2
USP11P51784 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
USP11P51784 SNORD115-35-201ENST00000365122 82 ntBASIC2.56□□□□□ -2
USP11P51784 RNU6-497P-201ENST00000365316 104 ntBASIC2.56□□□□□ -2
USP11P51784 MIR29C-201ENST00000385231 88 ntBASIC2.56□□□□□ -2
USP11P51784 MIR1283-2-201ENST00000408621 87 ntBASIC2.56□□□□□ -2
USP11P51784 RNU6-402P-201ENST00000410678 103 ntBASIC2.56□□□□□ -2
USP11P51784 MRPL35P3-201ENST00000421557 364 ntBASIC2.56□□□□□ -2
USP11P51784 RNU7-34P-201ENST00000459394 64 ntBASIC2.56□□□□□ -2
USP11P51784 RNVU1-2-201ENST00000516326 135 ntBASIC2.56□□□□□ -2
USP11P51784 RNU6-1018P-201ENST00000516577 106 ntBASIC2.56□□□□□ -2
USP11P51784 RNU6-267P-201ENST00000516714 103 ntBASIC2.56□□□□□ -2
USP11P51784 MIR548AR-201ENST00000582191 57 ntBASIC2.56□□□□□ -2
USP11P51784 MIR4791-201ENST00000607666 84 ntBASIC2.56□□□□□ -2
USP11P51784 MIR6840-201ENST00000611937 71 ntBASIC2.56□□□□□ -2
USP11P51784 MIR6717-201ENST00000622747 73 ntBASIC2.56□□□□□ -2
USP11P51784 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
USP11P51784 SNORD45B-201ENST00000364617 72 ntBASIC2.55□□□□□ -2
USP11P51784 Z98742.3-201ENST00000418637 326 ntBASIC2.55□□□□□ -2
USP11P51784 RPS29P29-201ENST00000456396 171 ntBASIC2.55□□□□□ -2
USP11P51784 RNU7-67P-201ENST00000459003 62 ntBASIC2.55□□□□□ -2
USP11P51784 snoU13.26-201ENST00000459452 105 ntBASIC2.55□□□□□ -2
USP11P51784 AC079804.2-201ENST00000490376 200 ntBASIC2.55□□□□□ -2
USP11P51784 MIR3152-201ENST00000579801 74 ntBASIC2.55□□□□□ -2
USP11P51784 AL020996.3-201ENST00000606617 222 ntBASIC2.55□□□□□ -2
USP11P51784 AC025521.1-201ENST00000621624 286 ntBASIC2.55□□□□□ -2
USP11P51784 SNORA1.2-201ENST00000365189 134 ntBASIC2.54□□□□□ -2
USP11P51784 RNU6-1276P-201ENST00000365372 104 ntBASIC2.54□□□□□ -2
USP11P51784 Y_RNA.430-201ENST00000384081 110 ntBASIC2.54□□□□□ -2
USP11P51784 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
USP11P51784 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
USP11P51784 Y_RNA.659-201ENST00000515994 113 ntBASIC2.54□□□□□ -2
USP11P51784 RNA5SP200-201ENST00000516360 103 ntBASIC2.54□□□□□ -2
USP11P51784 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.54□□□□□ -2
USP11P51784 RNU6-1313P-201ENST00000362622 102 ntBASIC2.53□□□□□ -2
USP11P51784 Y_RNA.247-201ENST00000364500 92 ntBASIC2.53□□□□□ -2
USP11P51784 RNU6-219P-201ENST00000364728 107 ntBASIC2.53□□□□□ -2
USP11P51784 SNORA32-201ENST00000384072 121 ntBASIC2.53□□□□□ -2
USP11P51784 RNU1-52P-201ENST00000384190 164 ntBASIC2.53□□□□□ -2
USP11P51784 MIR526A1-201ENST00000384897 85 ntBASIC2.53□□□□□ -2
USP11P51784 MIR452-201ENST00000385020 85 ntBASIC2.53□□□□□ -2
USP11P51784 MIR136-201ENST00000385207 82 ntBASIC2.53□□□□□ -2
USP11P51784 RNU11-3P-201ENST00000391111 133 ntBASIC2.53□□□□□ -2
USP11P51784 SNORD77B-201ENST00000391112 67 ntBASIC2.53□□□□□ -2
USP11P51784 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
USP11P51784 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
USP11P51784 RNU7-53P-201ENST00000516705 60 ntBASIC2.53□□□□□ -2
USP11P51784 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
USP11P51784 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.53□□□□□ -2
USP11P51784 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.53□□□□□ -2
USP11P51784 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
USP11P51784 RNU6-979P-201ENST00000383896 107 ntBASIC2.52□□□□□ -2.01
USP11P51784 HMGN2P3-201ENST00000433603 273 ntBASIC2.52□□□□□ -2.01
USP11P51784 HMGN2P5-201ENST00000436882 273 ntBASIC2.52□□□□□ -2.01
USP11P51784 RNU7-73P-201ENST00000458743 63 ntBASIC2.52□□□□□ -2.01
USP11P51784 SNORD123-201ENST00000459473 70 ntBASIC2.52□□□□□ -2.01
USP11P51784 UBL5P1-201ENST00000507979 193 ntBASIC2.52□□□□□ -2.01
USP11P51784 RNA5SP437-201ENST00000517249 129 ntBASIC2.52□□□□□ -2.01
USP11P51784 DNAJC19P9-201ENST00000555084 351 ntBASIC2.52□□□□□ -2.01
USP11P51784 AC243994.1-201ENST00000618627 109 ntBASIC2.52□□□□□ -2.01
USP11P51784 MIR7843-201ENST00000622274 79 ntBASIC2.52□□□□□ -2.01
USP11P51784 MIR3202-2-201ENST00000635980 79 ntBASIC2.52□□□□□ -2.01
USP11P51784 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms