Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
RXRGP48443 RNU4-54P-201ENST00000516428 129 ntBASIC0.69□□□□□ -2.3
RXRGP48443 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
RXRGP48443 AP001282.2-201ENST00000616149 309 ntBASIC0.69□□□□□ -2.3
RXRGP48443 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
RXRGP48443 MIR335-201ENST00000362173 94 ntBASIC0.68□□□□□ -2.3
RXRGP48443 Y_RNA.7-201ENST00000362352 102 ntBASIC0.68□□□□□ -2.3
RXRGP48443 RNU6-740P-201ENST00000364734 105 ntBASIC0.68□□□□□ -2.3
RXRGP48443 Y_RNA.634-201ENST00000364811 113 ntBASIC0.68□□□□□ -2.3
RXRGP48443 MIR616-201ENST00000385293 97 ntBASIC0.68□□□□□ -2.3
RXRGP48443 MIR18B-201ENST00000454574 71 ntBASIC0.68□□□□□ -2.3
RXRGP48443 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.68□□□□□ -2.3
RXRGP48443 SNORD36C-201ENST00000516733 66 ntBASIC0.68□□□□□ -2.3
RXRGP48443 MIR4643-201ENST00000577473 78 ntBASIC0.68□□□□□ -2.3
RXRGP48443 Z97988.1-201ENST00000637697 135 ntBASIC0.68□□□□□ -2.3
RXRGP48443 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
RXRGP48443 RNU6-369P-201ENST00000362515 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.82-201ENST00000363000 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.92-201ENST00000363043 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.235-201ENST00000364412 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.306-201ENST00000365015 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.312-201ENST00000365089 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.322-201ENST00000365151 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.483-201ENST00000384380 101 ntBASIC0.67□□□□□ -2.3
RXRGP48443 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
RXRGP48443 MIR548I3-201ENST00000408378 149 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.622-201ENST00000411091 108 ntBASIC0.67□□□□□ -2.3
RXRGP48443 AC244023.1-201ENST00000426884 112 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.650-201ENST00000459002 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 snoU13.21-201ENST00000459368 105 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.777-201ENST00000516982 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.771-201ENST00000598668 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 AC242498.1-201ENST00000604134 111 ntBASIC0.67□□□□□ -2.3
RXRGP48443 Y_RNA.789-201ENST00000622480 102 ntBASIC0.67□□□□□ -2.3
RXRGP48443 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RXRGP48443 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RXRGP48443 Y_RNA.66-201ENST00000362862 102 ntBASIC0.66□□□□□ -2.3
RXRGP48443 RNA5SP325-201ENST00000363756 130 ntBASIC0.66□□□□□ -2.3
RXRGP48443 Y_RNA.326-201ENST00000365176 113 ntBASIC0.66□□□□□ -2.3
RXRGP48443 MT-TT-201ENST00000387460 66 ntBASIC0.66□□□□□ -2.3
RXRGP48443 AL606845.1-201ENST00000404881 255 ntBASIC0.66□□□□□ -2.3
RXRGP48443 AC015818.7-201ENST00000428754 109 ntBASIC0.66□□□□□ -2.3
RXRGP48443 AC087499.7-201ENST00000441958 109 ntBASIC0.66□□□□□ -2.3
RXRGP48443 SNORD2.1-201ENST00000458762 69 ntBASIC0.66□□□□□ -2.3
RXRGP48443 RNU2-11P-201ENST00000459191 187 ntBASIC0.66□□□□□ -2.3
RXRGP48443 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
RXRGP48443 AL442663.2-201ENST00000554385 511 ntBASIC0.66□□□□□ -2.3
RXRGP48443 MIR8055-201ENST00000610739 97 ntBASIC0.66□□□□□ -2.3
RXRGP48443 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.66□□□□□ -2.3
RXRGP48443 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
RXRGP48443 MIR342-201ENST00000362212 99 ntBASIC0.65□□□□□ -2.31
RXRGP48443 Y_RNA.396-201ENST00000383949 103 ntBASIC0.65□□□□□ -2.31
RXRGP48443 RNU6-913P-201ENST00000390913 95 ntBASIC0.65□□□□□ -2.31
RXRGP48443 MIR938-201ENST00000401216 83 ntBASIC0.65□□□□□ -2.31
RXRGP48443 RPL39P25-201ENST00000449384 154 ntBASIC0.65□□□□□ -2.31
RXRGP48443 RNU6-998P-201ENST00000515894 101 ntBASIC0.65□□□□□ -2.31
RXRGP48443 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.65□□□□□ -2.31
RXRGP48443 MIR4676-201ENST00000583078 72 ntBASIC0.65□□□□□ -2.31
RXRGP48443 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
RXRGP48443 RNU6-1309P-201ENST00000363305 108 ntBASIC0.64□□□□□ -2.31
RXRGP48443 SNORA63-201ENST00000363450 132 ntBASIC0.64□□□□□ -2.31
RXRGP48443 RNU6-728P-201ENST00000365375 104 ntBASIC0.64□□□□□ -2.31
RXRGP48443 RNU6-484P-201ENST00000384016 107 ntBASIC0.64□□□□□ -2.31
RXRGP48443 Y_RNA.454-201ENST00000384224 113 ntBASIC0.64□□□□□ -2.31
RXRGP48443 Y_RNA.461-201ENST00000384263 103 ntBASIC0.64□□□□□ -2.31
RXRGP48443 RNU6-472P-201ENST00000384299 107 ntBASIC0.64□□□□□ -2.31
RXRGP48443 RNU6-364P-201ENST00000384387 107 ntBASIC0.64□□□□□ -2.31
RXRGP48443 MIR588-201ENST00000384900 83 ntBASIC0.64□□□□□ -2.31
RXRGP48443 MIR1257-201ENST00000408490 117 ntBASIC0.64□□□□□ -2.31
RXRGP48443 AF228730.3-201ENST00000436691 102 ntBASIC0.64□□□□□ -2.31
RXRGP48443 AL138752.1-201ENST00000452964 351 ntBASIC0.64□□□□□ -2.31
RXRGP48443 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.64□□□□□ -2.31
RXRGP48443 RNU7-80P-201ENST00000459562 61 ntBASIC0.64□□□□□ -2.31
RXRGP48443 RNY3P16-201ENST00000516338 101 ntBASIC0.64□□□□□ -2.31
RXRGP48443 RNU6-453P-201ENST00000516819 85 ntBASIC0.64□□□□□ -2.31
RXRGP48443 Y_RNA.720-201ENST00000517166 92 ntBASIC0.64□□□□□ -2.31
RXRGP48443 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
RXRGP48443 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
RXRGP48443 uc_338.6-201ENST00000613544 171 ntBASIC0.64□□□□□ -2.31
RXRGP48443 Y_RNA.91-201ENST00000363042 107 ntBASIC0.63□□□□□ -2.31
RXRGP48443 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
RXRGP48443 MIR568-201ENST00000385036 95 ntBASIC0.63□□□□□ -2.31
RXRGP48443 MIR140-201ENST00000385282 100 ntBASIC0.63□□□□□ -2.31
RXRGP48443 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
RXRGP48443 RNU6-1165P-201ENST00000410119 107 ntBASIC0.63□□□□□ -2.31
RXRGP48443 RNU6-561P-201ENST00000516222 102 ntBASIC0.63□□□□□ -2.31
RXRGP48443 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
RXRGP48443 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.63□□□□□ -2.31
RXRGP48443 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.63□□□□□ -2.31
RXRGP48443 AC010332.2-201ENST00000613083 1904 ntBASIC0.63□□□□□ -2.31
RXRGP48443 Y_RNA.176-201ENST00000363815 109 ntBASIC0.62□□□□□ -2.31
RXRGP48443 snoU2_19.4-201ENST00000364329 80 ntBASIC0.62□□□□□ -2.31
RXRGP48443 Y_RNA.262-201ENST00000364641 102 ntBASIC0.62□□□□□ -2.31
RXRGP48443 RNU4-17P-201ENST00000365598 141 ntBASIC0.62□□□□□ -2.31
RXRGP48443 Y_RNA.542-201ENST00000384641 111 ntBASIC0.62□□□□□ -2.31
RXRGP48443 RNU6-1237P-201ENST00000384777 107 ntBASIC0.62□□□□□ -2.31
RXRGP48443 RNU6-1319P-201ENST00000390855 104 ntBASIC0.62□□□□□ -2.31
RXRGP48443 RNU6-747P-201ENST00000390928 104 ntBASIC0.62□□□□□ -2.31
RXRGP48443 RNU6-241P-201ENST00000391148 104 ntBASIC0.62□□□□□ -2.31
RXRGP48443 RNU6-447P-201ENST00000410293 104 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms