Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNORD77.3-201ENST00000391113 65 ntBASIC1.57□□□□□ -2.16
COL15A1P39059 RNU6-588P-201ENST00000410281 105 ntBASIC1.57□□□□□ -2.16
COL15A1P39059 AC027119.1-201ENST00000440877 241 ntBASIC1.57□□□□□ -2.16
COL15A1P39059 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.57□□□□□ -2.16
COL15A1P39059 RNU7-43P-201ENST00000516554 64 ntBASIC1.57□□□□□ -2.16
COL15A1P39059 SNORD36C-201ENST00000516733 66 ntBASIC1.57□□□□□ -2.16
COL15A1P39059 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.56□□□□□ -2.16
COL15A1P39059 RNU6-1062P-201ENST00000383908 107 ntBASIC1.56□□□□□ -2.16
COL15A1P39059 SNORA70.7-201ENST00000384159 133 ntBASIC1.56□□□□□ -2.16
COL15A1P39059 SNORD111.1-201ENST00000516421 86 ntBASIC1.56□□□□□ -2.16
COL15A1P39059 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.56□□□□□ -2.16
COL15A1P39059 MIR548AR-201ENST00000582191 57 ntBASIC1.56□□□□□ -2.16
COL15A1P39059 AL121890.5-201ENST00000620848 304 ntBASIC1.56□□□□□ -2.16
COL15A1P39059 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
COL15A1P39059 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.55□□□□□ -2.16
COL15A1P39059 RNU6-1082P-201ENST00000364574 107 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 MIR624-201ENST00000385217 97 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 SNORD41-201ENST00000386967 70 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 MIR513C-201ENST00000401352 84 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.55□□□□□ -2.16
COL15A1P39059 RPL39P39-201ENST00000455840 151 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 RPL30P7-201ENST00000479312 323 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 MTND5P41-201ENST00000517498 206 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 AC112693.2-201ENST00000556538 232 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
COL15A1P39059 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
COL15A1P39059 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
COL15A1P39059 SNORD115-34-201ENST00000362441 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-12-201ENST00000362583 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-29-201ENST00000362834 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-9-201ENST00000362912 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-21-201ENST00000362963 81 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-14-201ENST00000363090 81 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-13-201ENST00000363358 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-41-201ENST00000363608 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-11-201ENST00000363616 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-5-201ENST00000363633 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-39-201ENST00000363694 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 Y_RNA.170-201ENST00000363746 110 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-4-201ENST00000363810 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-16-201ENST00000363887 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-6-201ENST00000363942 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-42-201ENST00000364273 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-15-201ENST00000364809 81 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-1-201ENST00000364961 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-26-201ENST00000365067 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-10-201ENST00000365073 81 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-43-201ENST00000365503 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-36-201ENST00000365629 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD28B-201ENST00000390993 75 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORA40.5-201ENST00000391061 128 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 RNU7-70P-201ENST00000516941 66 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 RNU6-255P-201ENST00000516957 105 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 RNU6-1212P-201ENST00000517023 104 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 AC090821.2-201ENST00000523552 176 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 MIR4764-201ENST00000580680 88 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SNORD115-40-201ENST00000606510 82 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.54□□□□□ -2.16
COL15A1P39059 AL442644.1-201ENST00000454390 3105 ntBASIC1.54□□□□□ -2.16
COL15A1P39059 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
COL15A1P39059 MIR342-201ENST00000362212 99 ntBASIC1.53□□□□□ -2.16
COL15A1P39059 Y_RNA.400-201ENST00000383963 111 ntBASIC1.53□□□□□ -2.16
COL15A1P39059 SNORA27-201ENST00000384323 126 ntBASIC1.53□□□□□ -2.16
COL15A1P39059 MIR570-201ENST00000384917 97 ntBASIC1.53□□□□□ -2.16
COL15A1P39059 RNU6-938P-201ENST00000411285 103 ntBASIC1.53□□□□□ -2.16
COL15A1P39059 RNU7-67P-201ENST00000459003 62 ntBASIC1.53□□□□□ -2.16
COL15A1P39059 MIR5197-201ENST00000583721 112 ntBASIC1.53□□□□□ -2.16
COL15A1P39059 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
COL15A1P39059 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
COL15A1P39059 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.52□□□□□ -2.17
COL15A1P39059 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.52□□□□□ -2.17
COL15A1P39059 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
COL15A1P39059 RPS26P48-201ENST00000491713 339 ntBASIC1.52□□□□□ -2.17
COL15A1P39059 Y_RNA.351-201ENST00000365436 96 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 SNORD18B-201ENST00000365659 72 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 SNORA51.10-201ENST00000384418 136 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 Y_RNA.584-201ENST00000391090 114 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 RNU7-200P-201ENST00000516105 62 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.51□□□□□ -2.17
COL15A1P39059 AL512310.8-201ENST00000550183 120 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 MIR3664-201ENST00000579074 99 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 AC131055.1-201ENST00000584626 316 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 AC243994.1-201ENST00000618627 109 ntBASIC1.51□□□□□ -2.17
COL15A1P39059 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL15A1P39059 Y_RNA.215-201ENST00000364204 112 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 Y_RNA.440-201ENST00000384120 114 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 MIR222-201ENST00000384992 110 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 MIR216A-201ENST00000385063 110 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 RPS29P24-201ENST00000486345 171 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 SNORA25.12-201ENST00000516202 82 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 RN7SKP88-201ENST00000516847 250 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 RNU6-958P-201ENST00000516995 106 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 MIR4791-201ENST00000607666 84 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 7SK.8-201ENST00000612110 250 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 7SK.11-201ENST00000615477 250 ntBASIC1.5□□□□□ -2.17
COL15A1P39059 7SK.13-201ENST00000622040 250 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms