Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SNORA24-201ENST00000384096 131 ntBASIC1.73□□□□□ -2.13
SLC6A4P31645 RPS29P29-201ENST00000456396 171 ntBASIC1.73□□□□□ -2.13
SLC6A4P31645 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.73□□□□□ -2.13
SLC6A4P31645 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
SLC6A4P31645 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
SLC6A4P31645 MIR8070-201ENST00000616510 88 ntBASIC1.73□□□□□ -2.13
SLC6A4P31645 AC091932.4-201ENST00000623386 200 ntBASIC1.73□□□□□ -2.13
SLC6A4P31645 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC6A4P31645 Y_RNA.71-201ENST00000362892 104 ntBASIC1.72□□□□□ -2.13
SLC6A4P31645 Y_RNA.127-201ENST00000363386 109 ntBASIC1.72□□□□□ -2.13
SLC6A4P31645 AP1B1P2-201ENST00000416196 106 ntBASIC1.72□□□□□ -2.13
SLC6A4P31645 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC6A4P31645 Y_RNA.651-201ENST00000459380 103 ntBASIC1.72□□□□□ -2.13
SLC6A4P31645 RNU6-313P-201ENST00000516317 112 ntBASIC1.72□□□□□ -2.13
SLC6A4P31645 MIR502-201ENST00000606349 86 ntBASIC1.72□□□□□ -2.13
SLC6A4P31645 Y_RNA.355-201ENST00000365462 98 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 RNY1P6-201ENST00000384193 109 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 MIR520C-201ENST00000385005 87 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 MIR518E-201ENST00000385252 88 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 RNA5SP261-201ENST00000410536 106 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 RNU2-51P-201ENST00000410708 197 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 RNU7-67P-201ENST00000459003 62 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 RNU5E-3P-201ENST00000515913 68 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 MIR4764-201ENST00000580680 88 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 AC243994.1-201ENST00000618627 109 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 MIR8063-201ENST00000621930 81 ntBASIC1.71□□□□□ -2.14
SLC6A4P31645 Y_RNA.218-201ENST00000364218 104 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 RNU6-1065P-201ENST00000384513 106 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 RNU6-1168P-201ENST00000390831 104 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 RNU6-1154P-201ENST00000391001 104 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 SNX2P2-201ENST00000424553 323 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 HSPE1P24-201ENST00000450782 238 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 RNU7-73P-201ENST00000458743 63 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 AC008834.1-201ENST00000511612 175 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 GHRLOS.1-201ENST00000610995 70 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.7□□□□□ -2.14
SLC6A4P31645 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SLC6A4P31645 AL596211.1-201ENST00000569873 2277 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 Y_RNA.291-201ENST00000364886 113 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 SNORA51.10-201ENST00000384418 136 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 Y_RNA.494-201ENST00000384432 111 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 SNORD28B-201ENST00000390993 75 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 RNU4-62P-201ENST00000410125 130 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 RNU2-11P-201ENST00000459191 187 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 AC079140.2-201ENST00000506193 142 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 MIR4791-201ENST00000607666 84 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 AC008133.2-201ENST00000624540 351 ntBASIC1.69□□□□□ -2.14
SLC6A4P31645 MIR342-201ENST00000362212 99 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 RNU6-349P-201ENST00000362402 107 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 RNU6-690P-201ENST00000365242 106 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 Y_RNA.617-201ENST00000410920 90 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 RNU6-893P-201ENST00000458841 100 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 snoU13.16-201ENST00000459350 104 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC6A4P31645 RNU6-1333P-201ENST00000516162 93 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 SNORD111.1-201ENST00000516421 86 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 RNU6-1234P-201ENST00000516877 103 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 Y_RNA.712-201ENST00000517011 92 ntBASIC1.68□□□□□ -2.14
SLC6A4P31645 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
SLC6A4P31645 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SLC6A4P31645 Y_RNA.116-201ENST00000363292 103 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 RNA5SP48-201ENST00000363969 126 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 Y_RNA.294-201ENST00000364916 102 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 SNORD1A-201ENST00000364968 72 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 SNORD41-201ENST00000386967 70 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 RPL30P7-201ENST00000479312 323 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 RNU6-659P-201ENST00000516454 104 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 RNU6-922P-201ENST00000516753 99 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 RNU6-958P-201ENST00000516995 106 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 AC133485.4-201ENST00000561835 220 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 AC138907.4-201ENST00000570107 226 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 MIR3152-201ENST00000579801 74 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 MIR4303-201ENST00000581299 66 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 AL512598.1-201ENST00000610158 273 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 AL365222.1-201ENST00000614661 98 ntBASIC1.67□□□□□ -2.14
SLC6A4P31645 RNU6-235P-201ENST00000362644 107 ntBASIC1.66□□□□□ -2.14
SLC6A4P31645 AC245517.4-201ENST00000448601 281 ntBASIC1.66□□□□□ -2.14
SLC6A4P31645 RPL39P39-201ENST00000455840 151 ntBASIC1.66□□□□□ -2.14
SLC6A4P31645 AC005908.1-201ENST00000468701 347 ntBASIC1.66□□□□□ -2.14
SLC6A4P31645 RNA5SP445-201ENST00000515889 115 ntBASIC1.66□□□□□ -2.14
SLC6A4P31645 RN7SKP19-201ENST00000516016 252 ntBASIC1.66□□□□□ -2.14
SLC6A4P31645 MIR4422-201ENST00000581938 83 ntBASIC1.66□□□□□ -2.14
SLC6A4P31645 AL137067.1-201ENST00000615933 120 ntBASIC1.66□□□□□ -2.14
SLC6A4P31645 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SLC6A4P31645 RNU6-508P-201ENST00000363231 103 ntBASIC1.65□□□□□ -2.15
SLC6A4P31645 RNA5SP205-201ENST00000364653 136 ntBASIC1.65□□□□□ -2.15
SLC6A4P31645 MIR934-201ENST00000401241 83 ntBASIC1.65□□□□□ -2.15
SLC6A4P31645 RNA5SP136-201ENST00000410906 107 ntBASIC1.65□□□□□ -2.15
SLC6A4P31645 RPL31P63-201ENST00000422565 375 ntBASIC1.65□□□□□ -2.15
SLC6A4P31645 RNU6-772P-201ENST00000516042 105 ntBASIC1.65□□□□□ -2.15
SLC6A4P31645 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
SLC6A4P31645 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
SLC6A4P31645 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SLC6A4P31645 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SLC6A4P31645 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.64□□□□□ -2.15
SLC6A4P31645 Y_RNA.563-201ENST00000384707 108 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms