Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MIR606-201ENST00000384851 96 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 RNU6-994P-201ENST00000410507 111 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 RNU2-55P-201ENST00000411146 174 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.51□□□□□ -2.33
HOXA9P31269 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.51□□□□□ -2.33
HOXA9P31269 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.51□□□□□ -2.33
HOXA9P31269 AC025627.3-201ENST00000582078 182 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 uc_338.6-201ENST00000613544 171 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 AC134878.1-201ENST00000619901 243 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 AL365265.1-201ENST00000621045 234 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 Y_RNA.396-201ENST00000383949 103 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 Y_RNA.416-201ENST00000384014 113 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 Y_RNA.461-201ENST00000384263 103 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 SNORA27-201ENST00000384323 126 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 RNU6-713P-201ENST00000384761 107 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 Y_RNA.574-201ENST00000384766 95 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AL606845.1-201ENST00000404881 255 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 MIR1302-6-201ENST00000408466 90 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 Y_RNA.622-201ENST00000411091 108 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AC244098.3-201ENST00000424803 96 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AC015818.7-201ENST00000428754 109 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 HMGN1P33-201ENST00000432945 451 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AC087499.7-201ENST00000441958 109 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 RNU7-73P-201ENST00000458743 63 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 RNU6-561P-201ENST00000516222 102 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 RNU6-1299P-201ENST00000516316 100 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 RNU6-504P-201ENST00000516568 104 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AL442663.2-201ENST00000554385 511 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AC006504.6-201ENST00000590142 199 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AC011921.3-201ENST00000605540 361 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
HOXA9P31269 MIR1-1-201ENST00000362147 71 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 RNU6-653P-201ENST00000363074 106 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 Y_RNA.304-201ENST00000365011 112 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 MIR616-201ENST00000385293 97 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 RNU6-1228P-201ENST00000391014 107 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 SNORD83.1-201ENST00000411362 77 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 AC067940.1-201ENST00000458411 300 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 RPS29P24-201ENST00000486345 171 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 MIR4264-201ENST00000583520 66 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 AC008737.2-201ENST00000599446 118 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 Y_RNA.812-201ENST00000610788 101 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 Y_RNA.784-201ENST00000613803 101 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 Y_RNA.787-201ENST00000616522 101 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 Y_RNA.780-201ENST00000617336 101 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 Y_RNA.801-201ENST00000619005 101 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 MIR376A2-201ENST00000636782 80 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 Z97988.1-201ENST00000637697 135 ntBASIC0.49□□□□□ -2.33
HOXA9P31269 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
HOXA9P31269 Y_RNA.23-201ENST00000362496 106 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 Y_RNA.76-201ENST00000362931 109 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 RNU6-934P-201ENST00000365154 107 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 SNORA1-201ENST00000384107 130 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 RNY3P5-201ENST00000384127 102 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 RNU6-738P-201ENST00000384531 106 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 RNU6-381P-201ENST00000391259 108 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 Y_RNA.590-201ENST00000410140 107 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 RNU6-1190P-201ENST00000410811 104 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 AL138752.1-201ENST00000452964 351 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 RNA5SP153-201ENST00000516498 76 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 RNU6-126P-201ENST00000516685 103 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 AL117187.1-201ENST00000555482 181 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 AC097639.2-201ENST00000603159 172 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 AP000753.3-201ENST00000604083 169 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 MIR6740-201ENST00000618268 113 ntBASIC0.48□□□□□ -2.33
HOXA9P31269 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
HOXA9P31269 Y_RNA.258-201ENST00000364613 105 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
HOXA9P31269 Y_RNA.432-201ENST00000384087 111 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 Y_RNA.440-201ENST00000384120 114 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 SNORD77.3-201ENST00000391113 65 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 RNU2-70P-201ENST00000410718 179 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 RNU6-602P-201ENST00000411155 105 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 RNA5SP330-201ENST00000517096 96 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 AC020891.4-201ENST00000605745 93 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 AL136317.1-201ENST00000612653 226 ntBASIC0.47□□□□□ -2.33
HOXA9P31269 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
HOXA9P31269 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HOXA9P31269 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
HOXA9P31269 Y_RNA.47-201ENST00000362697 108 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 Y_RNA.145-201ENST00000363527 102 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 Y_RNA.176-201ENST00000363815 109 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 RNU6-694P-201ENST00000364071 147 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 Y_RNA.277-201ENST00000364754 102 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 SNORD38B-201ENST00000384690 67 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 AL358176.2-201ENST00000425769 204 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 RNU2-11P-201ENST00000459191 187 ntBASIC0.46□□□□□ -2.34
HOXA9P31269 RNU6-998P-201ENST00000515894 101 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms