Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 RNU7-53P-201ENST00000516705 60 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 RN7SKP88-201ENST00000516847 250 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 CYP3A52P-201ENST00000563326 91 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 7SK.8-201ENST00000612110 250 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 7SK.11-201ENST00000615477 250 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 7SK.13-201ENST00000622040 250 ntBASIC1.48□□□□□ -2.17
EPHA3P29320 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
EPHA3P29320 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
EPHA3P29320 RNU6-1190P-201ENST00000410811 104 ntBASIC1.47□□□□□ -2.17
EPHA3P29320 AL392103.1-201ENST00000447000 198 ntBASIC1.47□□□□□ -2.17
EPHA3P29320 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
EPHA3P29320 Y_RNA.692-201ENST00000516627 105 ntBASIC1.47□□□□□ -2.17
EPHA3P29320 MIR4255-201ENST00000579351 72 ntBASIC1.47□□□□□ -2.17
EPHA3P29320 MIR548AO-201ENST00000579992 96 ntBASIC1.47□□□□□ -2.17
EPHA3P29320 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
EPHA3P29320 AC011603.4-201ENST00000611325 277 ntBASIC1.47□□□□□ -2.17
EPHA3P29320 RNA5SP48-201ENST00000363969 126 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 RNU4-16P-201ENST00000364737 141 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 RNU4-61P-201ENST00000411243 107 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 HMGN1P33-201ENST00000432945 451 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 RNU7-73P-201ENST00000458743 63 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 snoU13.16-201ENST00000459350 104 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 MIR3121-201ENST00000579680 77 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 U7.2-201ENST00000607576 63 ntBASIC1.46□□□□□ -2.18
EPHA3P29320 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
EPHA3P29320 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
EPHA3P29320 MIR1323-201ENST00000408090 73 ntBASIC1.45□□□□□ -2.18
EPHA3P29320 TMSB4XP3-201ENST00000445144 114 ntBASIC1.45□□□□□ -2.18
EPHA3P29320 RNU6-1211P-201ENST00000459179 105 ntBASIC1.45□□□□□ -2.18
EPHA3P29320 RNU6-971P-201ENST00000516920 106 ntBASIC1.45□□□□□ -2.18
EPHA3P29320 MIR3683-201ENST00000580847 82 ntBASIC1.45□□□□□ -2.18
EPHA3P29320 MIR3910-1-201ENST00000580936 111 ntBASIC1.45□□□□□ -2.18
EPHA3P29320 TUG1_4.1-201ENST00000619464 181 ntBASIC1.45□□□□□ -2.18
EPHA3P29320 RNU6-349P-201ENST00000362402 107 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 RNU6-690P-201ENST00000365242 106 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 RNY1P6-201ENST00000384193 109 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 AC048334.1-201ENST00000477975 159 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 AL133373.1-201ENST00000497098 94 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 RNU6-240P-201ENST00000516098 97 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.44□□□□□ -2.18
EPHA3P29320 AC108081.1-201ENST00000604358 221 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 AL020996.3-201ENST00000606617 222 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
EPHA3P29320 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
EPHA3P29320 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.43□□□□□ -2.18
EPHA3P29320 Y_RNA.114-201ENST00000363265 113 ntBASIC1.43□□□□□ -2.18
EPHA3P29320 AC090844.1-201ENST00000422019 156 ntBASIC1.43□□□□□ -2.18
EPHA3P29320 Y_RNA.757-201ENST00000578934 114 ntBASIC1.43□□□□□ -2.18
EPHA3P29320 RNA5SP99-201ENST00000364020 114 ntBASIC1.42□□□□□ -2.18
EPHA3P29320 MIR1302-7-201ENST00000408841 72 ntBASIC1.42□□□□□ -2.18
EPHA3P29320 SNORA31.2-201ENST00000516019 134 ntBASIC1.42□□□□□ -2.18
EPHA3P29320 RNA5SP458-201ENST00000516188 119 ntBASIC1.42□□□□□ -2.18
EPHA3P29320 AP000942.3-201ENST00000603702 160 ntBASIC1.42□□□□□ -2.18
EPHA3P29320 MIR8055-201ENST00000610739 97 ntBASIC1.42□□□□□ -2.18
EPHA3P29320 AC021613.1-201ENST00000623880 111 ntBASIC1.42□□□□□ -2.18
EPHA3P29320 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
EPHA3P29320 MIR103A2-201ENST00000362154 78 ntBASIC1.41□□□□□ -2.18
EPHA3P29320 RNU6-235P-201ENST00000362644 107 ntBASIC1.41□□□□□ -2.18
EPHA3P29320 RNU1-17P-201ENST00000363022 152 ntBASIC1.41□□□□□ -2.18
EPHA3P29320 RNA5SP190-201ENST00000365222 118 ntBASIC1.41□□□□□ -2.18
EPHA3P29320 Y_RNA.366-201ENST00000365540 102 ntBASIC1.41□□□□□ -2.18
EPHA3P29320 SNORA26.6-201ENST00000391256 115 ntBASIC1.41□□□□□ -2.18
EPHA3P29320 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.41□□□□□ -2.18
EPHA3P29320 DNAJC19P9-201ENST00000555084 351 ntBASIC1.41□□□□□ -2.18
EPHA3P29320 MIR6717-201ENST00000622747 73 ntBASIC1.41□□□□□ -2.18
EPHA3P29320 RNA5SP264-201ENST00000363115 107 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 SNORA1.1-201ENST00000364671 133 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 RNU6-1319P-201ENST00000390855 104 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 RNU6-747P-201ENST00000390928 104 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 SNORA67.5-201ENST00000391036 107 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 RNU6-241P-201ENST00000391148 104 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 MIR1185-1-201ENST00000408598 86 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 RNU6-177P-201ENST00000411257 104 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 RNU6-1054P-201ENST00000411293 104 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 AC245047.7-201ENST00000440265 293 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 RNU6-113P-201ENST00000516653 101 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 AP003716.2-201ENST00000528260 108 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 AC133485.4-201ENST00000561835 220 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 AC138907.4-201ENST00000570107 226 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 PRELID3BP2-201ENST00000605362 201 ntBASIC1.4□□□□□ -2.19
EPHA3P29320 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
EPHA3P29320 MIR539-201ENST00000365690 78 ntBASIC1.39□□□□□ -2.19
EPHA3P29320 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
EPHA3P29320 AL158147.1-201ENST00000443970 75 ntBASIC1.39□□□□□ -2.19
EPHA3P29320 RNU6-1234P-201ENST00000516877 103 ntBASIC1.39□□□□□ -2.19
EPHA3P29320 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.39□□□□□ -2.19
EPHA3P29320 MIR8065-201ENST00000620577 100 ntBASIC1.39□□□□□ -2.19
EPHA3P29320 Y_RNA.280-201ENST00000364765 112 ntBASIC1.38□□□□□ -2.19
EPHA3P29320 MIR3152-201ENST00000579801 74 ntBASIC1.38□□□□□ -2.19
EPHA3P29320 AC021443.1-201ENST00000604478 211 ntBASIC1.38□□□□□ -2.19
EPHA3P29320 Z97988.1-201ENST00000637697 135 ntBASIC1.38□□□□□ -2.19
EPHA3P29320 AC132825.6-201ENST00000638861 357 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms