Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MIR330-201ENST00000362196 94 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 Y_RNA.117-201ENST00000363294 101 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 SNORD45.3-201ENST00000363836 72 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 RNU4-45P-201ENST00000365469 141 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 RNU6-1189P-201ENST00000383958 107 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 MIR520F-201ENST00000384824 87 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 RNU6-1228P-201ENST00000391014 107 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 AC244098.3-201ENST00000424803 96 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.72□□□□□ -2.29
CAPN3P20807 SNORD2.1-201ENST00000458762 69 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 MIR4771-2-201ENST00000577758 74 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 MIR4771-1-201ENST00000582617 74 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 AP001282.2-201ENST00000616149 309 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 Z97988.1-201ENST00000637697 135 ntBASIC0.72□□□□□ -2.29
CAPN3P20807 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
CAPN3P20807 RNU6-740P-201ENST00000364734 105 ntBASIC0.71□□□□□ -2.3
CAPN3P20807 MIR616-201ENST00000385293 97 ntBASIC0.71□□□□□ -2.3
CAPN3P20807 SNORD77.3-201ENST00000391113 65 ntBASIC0.71□□□□□ -2.3
CAPN3P20807 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.71□□□□□ -2.3
CAPN3P20807 RNA5SP261-201ENST00000410536 106 ntBASIC0.71□□□□□ -2.3
CAPN3P20807 RNA5SP222-201ENST00000411039 105 ntBASIC0.71□□□□□ -2.3
CAPN3P20807 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.71□□□□□ -2.3
CAPN3P20807 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
CAPN3P20807 RNA5SP347-201ENST00000362445 119 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 Y_RNA.199-201ENST00000364014 102 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 Y_RNA.634-201ENST00000364811 113 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 Y_RNA.494-201ENST00000384432 111 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 MIR548A2-201ENST00000384956 97 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 RNU6-938P-201ENST00000411285 103 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 MIR18B-201ENST00000454574 71 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 SNORD36C-201ENST00000516733 66 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 Y_RNA.720-201ENST00000517166 92 ntBASIC0.7□□□□□ -2.3
CAPN3P20807 MIR302B-201ENST00000362188 73 ntBASIC0.69□□□□□ -2.3
CAPN3P20807 Y_RNA.66-201ENST00000362862 102 ntBASIC0.69□□□□□ -2.3
CAPN3P20807 MIR548I3-201ENST00000408378 149 ntBASIC0.69□□□□□ -2.3
CAPN3P20807 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
CAPN3P20807 SNORD83.1-201ENST00000411362 77 ntBASIC0.69□□□□□ -2.3
CAPN3P20807 AC097639.2-201ENST00000603159 172 ntBASIC0.69□□□□□ -2.3
CAPN3P20807 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
CAPN3P20807 SNORA63-201ENST00000363450 132 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 Y_RNA.258-201ENST00000364613 105 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 SNORA36.2-201ENST00000384004 127 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 RNU6-484P-201ENST00000384016 107 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 Y_RNA.461-201ENST00000384263 103 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 MIR573-201ENST00000384964 99 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 MIR520H-201ENST00000385126 88 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 AL606845.1-201ENST00000404881 255 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 Y_RNA.622-201ENST00000411091 108 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.68□□□□□ -2.3
CAPN3P20807 RNU6-998P-201ENST00000515894 101 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 MIR8055-201ENST00000610739 97 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 MIR8062-201ENST00000621515 85 ntBASIC0.68□□□□□ -2.3
CAPN3P20807 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CAPN3P20807 Y_RNA.304-201ENST00000365011 112 ntBASIC0.67□□□□□ -2.3
CAPN3P20807 Y_RNA.572-201ENST00000384757 98 ntBASIC0.67□□□□□ -2.3
CAPN3P20807 RNU6-913P-201ENST00000390913 95 ntBASIC0.67□□□□□ -2.3
CAPN3P20807 RNU2-11P-201ENST00000459191 187 ntBASIC0.67□□□□□ -2.3
CAPN3P20807 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
CAPN3P20807 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.67□□□□□ -2.3
CAPN3P20807 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
CAPN3P20807 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CAPN3P20807 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CAPN3P20807 Y_RNA.7-201ENST00000362352 102 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 RNU6-238P-201ENST00000363313 106 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 RNU6-728P-201ENST00000365375 104 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 RNU4-17P-201ENST00000365598 141 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 RNU6-716P-201ENST00000365621 103 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 Y_RNA.454-201ENST00000384224 113 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CAPN3P20807 AC090844.1-201ENST00000422019 156 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 AL358176.2-201ENST00000425769 204 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 AC244023.1-201ENST00000426884 112 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 AF228730.3-201ENST00000436691 102 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 RNU7-80P-201ENST00000459562 61 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 AP003072.1-201ENST00000531740 145 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 MIR4676-201ENST00000583078 72 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 AC242498.1-201ENST00000604134 111 ntBASIC0.66□□□□□ -2.3
CAPN3P20807 Y_RNA.91-201ENST00000363042 107 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 RNU6-103P-201ENST00000363686 107 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 Y_RNA.176-201ENST00000363815 109 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 Y_RNA.262-201ENST00000364641 102 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 RNU6-1160P-201ENST00000384546 104 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 Y_RNA.542-201ENST00000384641 111 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 MIR938-201ENST00000401216 83 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 RNU6-1153P-201ENST00000516760 105 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.65□□□□□ -2.31
CAPN3P20807 Y_RNA.352-201ENST00000365439 102 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 Y_RNA.440-201ENST00000384120 114 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 MIR588-201ENST00000384900 83 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 MT-TT-201ENST00000387460 66 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 RNU6-1165P-201ENST00000410119 107 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.64□□□□□ -2.31
CAPN3P20807 snoU13.21-201ENST00000459368 105 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 MIR4282-201ENST00000583613 67 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 AL365265.1-201ENST00000621045 234 ntBASIC0.64□□□□□ -2.31
CAPN3P20807 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms