Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Y_RNA.394-201ENST00000383942 103 ntBASIC0.11□□□□□ -2.39
HLA-DPA1P20036 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
HLA-DPA1P20036 AF228730.3-201ENST00000436691 102 ntBASIC0.11□□□□□ -2.39
HLA-DPA1P20036 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.11□□□□□ -2.39
HLA-DPA1P20036 MTND3P22-201ENST00000510932 243 ntBASIC0.11□□□□□ -2.39
HLA-DPA1P20036 RNU6-863P-201ENST00000515989 104 ntBASIC0.11□□□□□ -2.39
HLA-DPA1P20036 AP003733.2-201ENST00000529409 171 ntBASIC0.11□□□□□ -2.39
HLA-DPA1P20036 AC133485.4-201ENST00000561835 220 ntBASIC0.11□□□□□ -2.39
HLA-DPA1P20036 MIR5688-201ENST00000580619 83 ntBASIC0.11□□□□□ -2.39
HLA-DPA1P20036 MIR342-201ENST00000362212 99 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 RNU4-10P-201ENST00000364383 140 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 Y_RNA.258-201ENST00000364613 105 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 RNU6-450P-201ENST00000364654 107 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 RNU6-326P-201ENST00000365480 107 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 Y_RNA.395-201ENST00000383945 109 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 RNU6-815P-201ENST00000384080 113 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 RNU6-823P-201ENST00000391042 103 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 Y_RNA.645-201ENST00000391229 102 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 SNORD93-201ENST00000408813 74 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 RNA5SP330-201ENST00000517096 96 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 AL133255.1-201ENST00000606374 441 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 MIR6718-201ENST00000616153 80 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
HLA-DPA1P20036 RNU4-73P-201ENST00000363164 141 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 RNU6-1189P-201ENST00000383958 107 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.410-201ENST00000383992 113 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 SNORA26-201ENST00000391286 122 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 MIR1252-201ENST00000408861 65 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 RNU6-101P-201ENST00000410323 104 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 RPL39P25-201ENST00000449384 154 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.09□□□□□ -2.4
HLA-DPA1P20036 RNU6-469P-201ENST00000516253 101 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.702-201ENST00000516843 96 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 snoU18.1-201ENST00000629629 71 ntBASIC0.09□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.105-201ENST00000363182 111 ntBASIC0.08□□□□□ -2.4
HLA-DPA1P20036 RNU6-121P-201ENST00000410525 99 ntBASIC0.08□□□□□ -2.4
HLA-DPA1P20036 RNU4-83P-201ENST00000410863 133 ntBASIC0.08□□□□□ -2.4
HLA-DPA1P20036 SNORA27.4-201ENST00000516650 95 ntBASIC0.08□□□□□ -2.4
HLA-DPA1P20036 SNORA40.15-201ENST00000516884 107 ntBASIC0.08□□□□□ -2.4
HLA-DPA1P20036 AL008718.3-201ENST00000610217 321 ntBASIC0.08□□□□□ -2.4
HLA-DPA1P20036 MIR369-201ENST00000362155 70 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 MIR302B-201ENST00000362188 73 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.24-201ENST00000362508 103 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.217-201ENST00000364214 105 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.389-201ENST00000383924 113 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.440-201ENST00000384120 114 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.541-201ENST00000384640 113 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 SNORA8.3-201ENST00000384679 139 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 MIR1197-201ENST00000408818 88 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 AL731563.1-201ENST00000442202 214 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.641-201ENST00000459414 105 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 RNU6-1299P-201ENST00000516316 100 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.721-201ENST00000517207 102 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 AC131281.1-201ENST00000522984 164 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 AP003327.1-201ENST00000529684 127 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.07□□□□□ -2.4
HLA-DPA1P20036 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.66-201ENST00000362862 102 ntBASIC0.06□□□□□ -2.4
HLA-DPA1P20036 SNORA36.1-201ENST00000363424 132 ntBASIC0.06□□□□□ -2.4
HLA-DPA1P20036 RNU6-1099P-201ENST00000363533 107 ntBASIC0.06□□□□□ -2.4
HLA-DPA1P20036 RNU6-740P-201ENST00000364734 105 ntBASIC0.06□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.380-201ENST00000365663 111 ntBASIC0.06□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.476-201ENST00000384347 108 ntBASIC0.06□□□□□ -2.4
HLA-DPA1P20036 AP001282.2-201ENST00000616149 309 ntBASIC0.06□□□□□ -2.4
HLA-DPA1P20036 MIR6717-201ENST00000622747 73 ntBASIC0.06□□□□□ -2.4
HLA-DPA1P20036 snoU2_19.2-201ENST00000363024 80 ntBASIC0.05□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.229-201ENST00000364347 113 ntBASIC0.05□□□□□ -2.4
HLA-DPA1P20036 MIR644A-201ENST00000385262 94 ntBASIC0.05□□□□□ -2.4
HLA-DPA1P20036 RNU2-59P-201ENST00000410482 191 ntBASIC0.05□□□□□ -2.4
HLA-DPA1P20036 RNA5SP261-201ENST00000410536 106 ntBASIC0.05□□□□□ -2.4
HLA-DPA1P20036 AL512326.2-201ENST00000426359 151 ntBASIC0.05□□□□□ -2.4
HLA-DPA1P20036 AC082651.2-201ENST00000496833 166 ntBASIC0.05□□□□□ -2.4
HLA-DPA1P20036 MIR8066-201ENST00000617280 78 ntBASIC0.05□□□□□ -2.4
HLA-DPA1P20036 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.31-201ENST00000362574 102 ntBASIC0.04□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.42-201ENST00000362660 108 ntBASIC0.04□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.572-201ENST00000384757 98 ntBASIC0.04□□□□□ -2.4
HLA-DPA1P20036 MT-TD-201ENST00000387419 68 ntBASIC0.04□□□□□ -2.4
HLA-DPA1P20036 RNA5SP237-201ENST00000410414 113 ntBASIC0.04□□□□□ -2.4
HLA-DPA1P20036 RNU2-55P-201ENST00000411146 174 ntBASIC0.04□□□□□ -2.4
HLA-DPA1P20036 MIR548S-201ENST00000581352 82 ntBASIC0.04□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.91-201ENST00000363042 107 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.115-201ENST00000363272 98 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 RNU6-770P-201ENST00000363929 105 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.634-201ENST00000364811 113 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 MIR215-201ENST00000384858 110 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 RNA5SP63-201ENST00000391225 112 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 SNORA26.6-201ENST00000391256 115 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 Y_RNA.617-201ENST00000410920 90 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 RNU7-45P-201ENST00000459460 63 ntBASIC0.03□□□□□ -2.4
HLA-DPA1P20036 RNU6-653P-201ENST00000363074 106 ntBASIC0.02□□□□□ -2.41
HLA-DPA1P20036 Y_RNA.351-201ENST00000365436 96 ntBASIC0.02□□□□□ -2.41
HLA-DPA1P20036 SNORD42.2-201ENST00000365570 69 ntBASIC0.02□□□□□ -2.41
HLA-DPA1P20036 Y_RNA.431-201ENST00000384086 102 ntBASIC0.02□□□□□ -2.41
HLA-DPA1P20036 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.02□□□□□ -2.41
HLA-DPA1P20036 RNY3P15-201ENST00000516297 97 ntBASIC0.02□□□□□ -2.41
HLA-DPA1P20036 RNA5SP268-201ENST00000516828 124 ntBASIC0.02□□□□□ -2.41
HLA-DPA1P20036 Y_RNA.804-201ENST00000615262 101 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 255.4 ms