Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC244098.3-201ENST00000424803 96 ntBASIC0.69□□□□□ -2.3
ERCC2P18074 AL358176.2-201ENST00000425769 204 ntBASIC0.69□□□□□ -2.3
ERCC2P18074 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
ERCC2P18074 AL138752.1-201ENST00000452964 351 ntBASIC0.69□□□□□ -2.3
ERCC2P18074 AL360085.1-201ENST00000604713 532 ntBASIC0.69□□□□□ -2.3
ERCC2P18074 RNU6-934P-201ENST00000365154 107 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 Y_RNA.355-201ENST00000365462 98 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 RNU4-17P-201ENST00000365598 141 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 Y_RNA.508-201ENST00000384502 114 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
ERCC2P18074 SNORD83.1-201ENST00000411362 77 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 HMGN1P33-201ENST00000432945 451 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 AC097639.2-201ENST00000603159 172 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 MIR8055-201ENST00000610739 97 ntBASIC0.68□□□□□ -2.3
ERCC2P18074 Y_RNA.23-201ENST00000362496 106 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 Y_RNA.76-201ENST00000362931 109 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 Y_RNA.262-201ENST00000364641 102 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 RNU6-1189P-201ENST00000383958 107 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 Y_RNA.410-201ENST00000383992 113 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 SNORA1-201ENST00000384107 130 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 SNORD38B-201ENST00000384690 67 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.67□□□□□ -2.3
ERCC2P18074 RNU7-62P-201ENST00000458856 62 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 SNORD127-201ENST00000458892 86 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 snoU13.18-201ENST00000459483 104 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 RNU6-561P-201ENST00000516222 102 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 AL442067.1-201ENST00000613261 223 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 RMST_2.1-201ENST00000617263 136 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 SNORD38B-202ENST00000625943 69 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 Z97988.1-201ENST00000637697 135 ntBASIC0.67□□□□□ -2.3
ERCC2P18074 MIR342-201ENST00000362212 99 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 Y_RNA.7-201ENST00000362352 102 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 Y_RNA.288-201ENST00000364854 92 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 Y_RNA.292-201ENST00000364904 97 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 Y_RNA.440-201ENST00000384120 114 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 AC015818.7-201ENST00000428754 109 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 AC087499.7-201ENST00000441958 109 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 RNU2-11P-201ENST00000459191 187 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 RNU7-96P-201ENST00000459535 64 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.66□□□□□ -2.3
ERCC2P18074 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 MIR4771-2-201ENST00000577758 74 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 MIR4771-1-201ENST00000582617 74 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 AC011921.3-201ENST00000605540 361 ntBASIC0.66□□□□□ -2.3
ERCC2P18074 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
ERCC2P18074 SNORA1.1-201ENST00000364671 133 ntBASIC0.65□□□□□ -2.31
ERCC2P18074 SNORD77.3-201ENST00000391113 65 ntBASIC0.65□□□□□ -2.31
ERCC2P18074 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.65□□□□□ -2.31
ERCC2P18074 RNU6-1190P-201ENST00000410811 104 ntBASIC0.65□□□□□ -2.31
ERCC2P18074 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
ERCC2P18074 RNU6-998P-201ENST00000515894 101 ntBASIC0.65□□□□□ -2.31
ERCC2P18074 RNU6-728P-201ENST00000365375 104 ntBASIC0.64□□□□□ -2.31
ERCC2P18074 MIR520F-201ENST00000384824 87 ntBASIC0.64□□□□□ -2.31
ERCC2P18074 MIR548I3-201ENST00000408378 149 ntBASIC0.64□□□□□ -2.31
ERCC2P18074 MIR548H3-201ENST00000408771 118 ntBASIC0.64□□□□□ -2.31
ERCC2P18074 RNU6-327P-201ENST00000516270 127 ntBASIC0.64□□□□□ -2.31
ERCC2P18074 RNU6-977P-201ENST00000516411 103 ntBASIC0.64□□□□□ -2.31
ERCC2P18074 MIR3129-201ENST00000581095 76 ntBASIC0.64□□□□□ -2.31
ERCC2P18074 uc_338.6-201ENST00000613544 171 ntBASIC0.64□□□□□ -2.31
ERCC2P18074 RNU6-103P-201ENST00000363686 107 ntBASIC0.63□□□□□ -2.31
ERCC2P18074 SNORA79-201ENST00000408376 140 ntBASIC0.63□□□□□ -2.31
ERCC2P18074 RNU6-602P-201ENST00000411155 105 ntBASIC0.63□□□□□ -2.31
ERCC2P18074 RNU6-1132P-201ENST00000459214 107 ntBASIC0.63□□□□□ -2.31
ERCC2P18074 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.63□□□□□ -2.31
ERCC2P18074 RNY3P16-201ENST00000516338 101 ntBASIC0.63□□□□□ -2.31
ERCC2P18074 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
ERCC2P18074 MIR6740-201ENST00000618268 113 ntBASIC0.63□□□□□ -2.31
ERCC2P18074 MIR376A2-201ENST00000636782 80 ntBASIC0.63□□□□□ -2.31
ERCC2P18074 Y_RNA.133-201ENST00000363428 110 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 SNORD27-201ENST00000363981 72 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 Y_RNA.562-201ENST00000384695 113 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 MIR588-201ENST00000384900 83 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 MIR568-201ENST00000385036 95 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 MIR520H-201ENST00000385126 88 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
ERCC2P18074 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 MTND2P23-201ENST00000422990 651 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 MTCYBP9-201ENST00000431021 303 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 AC022709.1-201ENST00000615967 87 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
ERCC2P18074 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
ERCC2P18074 Y_RNA.308-201ENST00000365043 101 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 Y_RNA.351-201ENST00000365436 96 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 AL121914.1-201ENST00000450188 156 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 MIR4744-201ENST00000581563 82 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 MIR4804-201ENST00000581683 73 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 MIR4676-201ENST00000583078 72 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 AC020891.4-201ENST00000605745 93 ntBASIC0.61□□□□□ -2.31
ERCC2P18074 MIR302B-201ENST00000362188 73 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 Y_RNA.118-201ENST00000363300 101 ntBASIC0.6□□□□□ -2.31
ERCC2P18074 Y_RNA.354-201ENST00000365448 111 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 224.6 ms