Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MIR410-201ENST00000362222 80 ntBASIC-2.59□□□□□ -2.82
HMGA1P17096 SNORD50.1-201ENST00000362987 71 ntBASIC-2.59□□□□□ -2.82
HMGA1P17096 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.59□□□□□ -2.82
HMGA1P17096 RNY1P12-201ENST00000364251 105 ntBASIC-2.59□□□□□ -2.82
HMGA1P17096 RNU6-938P-201ENST00000411285 103 ntBASIC-2.59□□□□□ -2.82
HMGA1P17096 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.59□□□□□ -2.82
HMGA1P17096 RNU7-167P-201ENST00000459160 62 ntBASIC-2.59□□□□□ -2.82
HMGA1P17096 RNU6-1208P-201ENST00000459588 107 ntBASIC-2.59□□□□□ -2.82
HMGA1P17096 AL133215.3-201ENST00000609801 448 ntBASIC-2.59□□□□□ -2.82
HMGA1P17096 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.6□□□□□ -2.83
HMGA1P17096 FGF7P6-202ENST00000451282 293 ntBASIC-2.6□□□□□ -2.83
HMGA1P17096 RNU6-168P-201ENST00000516189 101 ntBASIC-2.6□□□□□ -2.83
HMGA1P17096 SNORD36C-201ENST00000516733 66 ntBASIC-2.6□□□□□ -2.83
HMGA1P17096 UBE2V2P2-201ENST00000587677 504 ntBASIC-2.6□□□□□ -2.83
HMGA1P17096 MIR548AY-201ENST00000617669 107 ntBASIC-2.6□□□□□ -2.83
HMGA1P17096 MIR3674-201ENST00000636576 68 ntBASIC-2.6□□□□□ -2.83
HMGA1P17096 Y_RNA.97-201ENST00000363094 102 ntBASIC-2.61□□□□□ -2.83
HMGA1P17096 Y_RNA.399-201ENST00000383955 105 ntBASIC-2.61□□□□□ -2.83
HMGA1P17096 MIR617-201ENST00000385030 97 ntBASIC-2.61□□□□□ -2.83
HMGA1P17096 MIRLET7B-201ENST00000385140 83 ntBASIC-2.61□□□□□ -2.83
HMGA1P17096 MTND2P30-201ENST00000456663 382 ntBASIC-2.61□□□□□ -2.83
HMGA1P17096 AC007012.1-201ENST00000567192 175 ntBASIC-2.61□□□□□ -2.83
HMGA1P17096 U2.17-201ENST00000611454 95 ntBASIC-2.61□□□□□ -2.83
HMGA1P17096 uc_338.11-201ENST00000619132 160 ntBASIC-2.61□□□□□ -2.83
HMGA1P17096 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.62□□□□□ -2.83
HMGA1P17096 SNORD115-30-201ENST00000364117 82 ntBASIC-2.62□□□□□ -2.83
HMGA1P17096 RNU4-20P-201ENST00000365601 151 ntBASIC-2.62□□□□□ -2.83
HMGA1P17096 SNORA51.5-201ENST00000384126 131 ntBASIC-2.62□□□□□ -2.83
HMGA1P17096 RNU6-933P-201ENST00000384424 107 ntBASIC-2.62□□□□□ -2.83
HMGA1P17096 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.62□□□□□ -2.83
HMGA1P17096 AC116353.3-201ENST00000511215 249 ntBASIC-2.62□□□□□ -2.83
HMGA1P17096 MIR4775-201ENST00000581168 75 ntBASIC-2.62□□□□□ -2.83
HMGA1P17096 RNU6-601P-201ENST00000384540 107 ntBASIC-2.63□□□□□ -2.83
HMGA1P17096 RNU6-192P-201ENST00000391253 100 ntBASIC-2.63□□□□□ -2.83
HMGA1P17096 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-2.63□□□□□ -2.83
HMGA1P17096 MIR5583-1-201ENST00000580941 59 ntBASIC-2.63□□□□□ -2.83
HMGA1P17096 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-2.63□□□□□ -2.83
HMGA1P17096 AC073534.2-201ENST00000620377 381 ntBASIC-2.63□□□□□ -2.83
HMGA1P17096 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.64□□□□□ -2.83
HMGA1P17096 SNORD115-23-201ENST00000364461 82 ntBASIC-2.64□□□□□ -2.83
HMGA1P17096 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.64□□□□□ -2.83
HMGA1P17096 RNU6-281P-201ENST00000384212 103 ntBASIC-2.64□□□□□ -2.83
HMGA1P17096 SNORA26.4-201ENST00000391188 123 ntBASIC-2.64□□□□□ -2.83
HMGA1P17096 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.64□□□□□ -2.83
HMGA1P17096 RNU6-625P-201ENST00000459412 107 ntBASIC-2.64□□□□□ -2.83
HMGA1P17096 RNU7-96P-201ENST00000459535 64 ntBASIC-2.64□□□□□ -2.83
HMGA1P17096 RNU6-998P-201ENST00000515894 101 ntBASIC-2.64□□□□□ -2.83
HMGA1P17096 MIR582-201ENST00000365731 98 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 RNU6-533P-201ENST00000384144 107 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 RNU6-524P-201ENST00000384270 107 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 MIR190B-201ENST00000401119 79 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 ELOCP20-201ENST00000422460 345 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 CHEK2P4-201ENST00000450340 246 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 MTND2P3-201ENST00000452458 470 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 MIR4703-201ENST00000577728 79 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 AC122108.2-201ENST00000611946 526 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 AC006386.1-201ENST00000619436 415 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 AL607023.1-201ENST00000620045 248 ntBASIC-2.65□□□□□ -2.83
HMGA1P17096 MIR302B-201ENST00000362188 73 ntBASIC-2.66□□□□□ -2.84
HMGA1P17096 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.66□□□□□ -2.84
HMGA1P17096 AL031003.1-201ENST00000404229 172 ntBASIC-2.66□□□□□ -2.84
HMGA1P17096 RNU7-195P-201ENST00000458793 62 ntBASIC-2.66□□□□□ -2.84
HMGA1P17096 AC112204.1-201ENST00000502591 103 ntBASIC-2.66□□□□□ -2.84
HMGA1P17096 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-2.66□□□□□ -2.84
HMGA1P17096 SEPT14P19-203ENST00000633205 211 ntBASIC-2.66□□□□□ -2.84
HMGA1P17096 RNU6-1329P-201ENST00000365664 107 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 RNU6-1086P-201ENST00000410930 100 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 RNU4-88P-201ENST00000411220 86 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 MIR2113-201ENST00000459007 91 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 RNU6-334P-201ENST00000517072 102 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 RNU6-1028P-201ENST00000517164 93 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 AC005771.1-201ENST00000585581 349 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 AC006927.2-201ENST00000639256 389 ntBASIC-2.67□□□□□ -2.84
HMGA1P17096 Y_RNA.231-201ENST00000364358 102 ntBASIC-2.68□□□□□ -2.84
HMGA1P17096 RNU6-841P-201ENST00000383872 107 ntBASIC-2.68□□□□□ -2.84
HMGA1P17096 RNU6-128P-201ENST00000383976 107 ntBASIC-2.68□□□□□ -2.84
HMGA1P17096 SNORD115.1-201ENST00000391109 76 ntBASIC-2.68□□□□□ -2.84
HMGA1P17096 RNU2-14P-201ENST00000411053 191 ntBASIC-2.68□□□□□ -2.84
HMGA1P17096 TPTE2P5-203ENST00000458118 728 ntBASIC-2.68□□□□□ -2.84
HMGA1P17096 RNU6-551P-201ENST00000516661 103 ntBASIC-2.68□□□□□ -2.84
HMGA1P17096 MIR548AM-201ENST00000584298 74 ntBASIC-2.68□□□□□ -2.84
HMGA1P17096 RNU6-169P-201ENST00000365336 107 ntBASIC-2.69□□□□□ -2.84
HMGA1P17096 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-2.69□□□□□ -2.84
HMGA1P17096 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-2.69□□□□□ -2.84
HMGA1P17096 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.69□□□□□ -2.84
HMGA1P17096 MIR5188-201ENST00000583467 113 ntBASIC-2.69□□□□□ -2.84
HMGA1P17096 SNORA62.4-201ENST00000365504 151 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 UBE2V1P12-201ENST00000503954 474 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 Y_RNA.809-201ENST00000516058 95 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 RNU7-116P-201ENST00000516940 62 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 AC145350.1-201ENST00000567426 208 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 MIR4308-201ENST00000580634 81 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 MIR2681-201ENST00000581814 105 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 AC245884.10-201ENST00000597355 337 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 AL359881.1-201ENST00000602916 267 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 AL158063.1-201ENST00000615349 536 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 AL669831.3-213ENST00000636676 183 ntBASIC-2.7□□□□□ -2.84
HMGA1P17096 AC016550.1-201ENST00000505348 785 ntBASIC-2.71□□□□□ -2.84
HMGA1P17096 RNU6-1114P-201ENST00000516022 107 ntBASIC-2.71□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms