Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
CDH1P12830 Y_RNA.351-201ENST00000365436 96 ntBASIC1.21□□□□□ -2.22
CDH1P12830 SNORA51.10-201ENST00000384418 136 ntBASIC1.21□□□□□ -2.22
CDH1P12830 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH1P12830 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
CDH1P12830 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
CDH1P12830 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
CDH1P12830 AC091932.4-201ENST00000623386 200 ntBASIC1.21□□□□□ -2.22
CDH1P12830 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDH1P12830 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.2□□□□□ -2.22
CDH1P12830 MIR26B-201ENST00000362251 77 ntBASIC1.2□□□□□ -2.22
CDH1P12830 SNORA70.7-201ENST00000384159 133 ntBASIC1.2□□□□□ -2.22
CDH1P12830 RNU6-460P-201ENST00000391158 108 ntBASIC1.2□□□□□ -2.22
CDH1P12830 AL035398.1-201ENST00000430869 322 ntBASIC1.2□□□□□ -2.22
CDH1P12830 RPL39P39-201ENST00000455840 151 ntBASIC1.2□□□□□ -2.22
CDH1P12830 RNU7-67P-201ENST00000459003 62 ntBASIC1.2□□□□□ -2.22
CDH1P12830 RNU2-11P-201ENST00000459191 187 ntBASIC1.2□□□□□ -2.22
CDH1P12830 RNU6-426P-201ENST00000516464 97 ntBASIC1.2□□□□□ -2.22
CDH1P12830 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
CDH1P12830 RNU6-958P-201ENST00000516995 106 ntBASIC1.2□□□□□ -2.22
CDH1P12830 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
CDH1P12830 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
CDH1P12830 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CDH1P12830 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
CDH1P12830 MIR4251-201ENST00000635819 61 ntBASIC1.2□□□□□ -2.22
CDH1P12830 Y_RNA.120-201ENST00000363304 110 ntBASIC1.19□□□□□ -2.22
CDH1P12830 RNA5SP48-201ENST00000363969 126 ntBASIC1.19□□□□□ -2.22
CDH1P12830 RNU6-187P-201ENST00000384139 106 ntBASIC1.19□□□□□ -2.22
CDH1P12830 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
CDH1P12830 RNU6-913P-201ENST00000390913 95 ntBASIC1.19□□□□□ -2.22
CDH1P12830 MIR548M-201ENST00000408260 86 ntBASIC1.19□□□□□ -2.22
CDH1P12830 MIR1302-7-201ENST00000408841 72 ntBASIC1.19□□□□□ -2.22
CDH1P12830 RNU6-1054P-201ENST00000411293 104 ntBASIC1.19□□□□□ -2.22
CDH1P12830 RNU7-73P-201ENST00000458743 63 ntBASIC1.19□□□□□ -2.22
CDH1P12830 RNU7-80P-201ENST00000459562 61 ntBASIC1.19□□□□□ -2.22
CDH1P12830 AL133373.1-201ENST00000497098 94 ntBASIC1.19□□□□□ -2.22
CDH1P12830 RNU6-237P-201ENST00000515985 71 ntBASIC1.19□□□□□ -2.22
CDH1P12830 RNA5SP272-201ENST00000516095 111 ntBASIC1.19□□□□□ -2.22
CDH1P12830 Y_RNA.686-201ENST00000516548 134 ntBASIC1.19□□□□□ -2.22
CDH1P12830 AP003716.2-201ENST00000528260 108 ntBASIC1.19□□□□□ -2.22
CDH1P12830 MIR548AO-201ENST00000579992 96 ntBASIC1.19□□□□□ -2.22
CDH1P12830 MIR3124-201ENST00000582636 67 ntBASIC1.19□□□□□ -2.22
CDH1P12830 AP001485.1-201ENST00000604799 199 ntBASIC1.19□□□□□ -2.22
CDH1P12830 MIR342-201ENST00000362212 99 ntBASIC1.18□□□□□ -2.22
CDH1P12830 RNU6-508P-201ENST00000363231 103 ntBASIC1.18□□□□□ -2.22
CDH1P12830 Y_RNA.420-201ENST00000384043 110 ntBASIC1.18□□□□□ -2.22
CDH1P12830 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
CDH1P12830 SNORA20-201ENST00000384662 132 ntBASIC1.18□□□□□ -2.22
CDH1P12830 Y_RNA.568-201ENST00000384742 113 ntBASIC1.18□□□□□ -2.22
CDH1P12830 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.18□□□□□ -2.22
CDH1P12830 snoU13.16-201ENST00000459350 104 ntBASIC1.18□□□□□ -2.22
CDH1P12830 RNU7-53P-201ENST00000516705 60 ntBASIC1.18□□□□□ -2.22
CDH1P12830 SNORA25.3-201ENST00000363205 127 ntBASIC1.17□□□□□ -2.22
CDH1P12830 RNU1-133P-201ENST00000364867 167 ntBASIC1.17□□□□□ -2.22
CDH1P12830 RNU6-915P-201ENST00000364943 103 ntBASIC1.17□□□□□ -2.22
CDH1P12830 Y_RNA.454-201ENST00000384224 113 ntBASIC1.17□□□□□ -2.22
CDH1P12830 AL603914.1-201ENST00000401964 204 ntBASIC1.17□□□□□ -2.22
CDH1P12830 AL603908.1-201ENST00000406098 201 ntBASIC1.17□□□□□ -2.22
CDH1P12830 AC245047.7-201ENST00000440265 293 ntBASIC1.17□□□□□ -2.22
CDH1P12830 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH1P12830 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.17□□□□□ -2.22
CDH1P12830 AC048334.1-201ENST00000477975 159 ntBASIC1.17□□□□□ -2.22
CDH1P12830 MIR8055-201ENST00000610739 97 ntBASIC1.17□□□□□ -2.22
CDH1P12830 AP001340.1-201ENST00000624405 217 ntBASIC1.17□□□□□ -2.22
CDH1P12830 AL596211.1-201ENST00000569873 2277 ntBASIC1.17□□□□□ -2.22
CDH1P12830 RNU6-309P-201ENST00000364573 106 ntBASIC1.16□□□□□ -2.22
CDH1P12830 Y_RNA.343-201ENST00000365354 112 ntBASIC1.16□□□□□ -2.22
CDH1P12830 SNORD50.2-201ENST00000365465 70 ntBASIC1.16□□□□□ -2.22
CDH1P12830 AL392103.1-201ENST00000447000 198 ntBASIC1.16□□□□□ -2.22
CDH1P12830 Y_RNA.651-201ENST00000459380 103 ntBASIC1.16□□□□□ -2.22
CDH1P12830 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.16□□□□□ -2.22
CDH1P12830 PRELID3BP2-201ENST00000605362 201 ntBASIC1.16□□□□□ -2.22
CDH1P12830 AL020996.3-201ENST00000606617 222 ntBASIC1.16□□□□□ -2.22
CDH1P12830 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.16□□□□□ -2.22
CDH1P12830 AC010332.2-201ENST00000613083 1904 ntBASIC1.16□□□□□ -2.22
CDH1P12830 RNU6-349P-201ENST00000362402 107 ntBASIC1.15□□□□□ -2.23
CDH1P12830 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
CDH1P12830 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
CDH1P12830 SNORA26.6-201ENST00000391256 115 ntBASIC1.15□□□□□ -2.23
CDH1P12830 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
CDH1P12830 MIR1185-1-201ENST00000408598 86 ntBASIC1.15□□□□□ -2.23
CDH1P12830 RNU6-1190P-201ENST00000410811 104 ntBASIC1.15□□□□□ -2.23
CDH1P12830 MTATP6P21-201ENST00000440681 189 ntBASIC1.15□□□□□ -2.23
CDH1P12830 RNU7-45P-201ENST00000459460 63 ntBASIC1.15□□□□□ -2.23
CDH1P12830 SNORA31.2-201ENST00000516019 134 ntBASIC1.15□□□□□ -2.23
CDH1P12830 Y_RNA.690-201ENST00000516603 95 ntBASIC1.15□□□□□ -2.23
CDH1P12830 RNU7-70P-201ENST00000516941 66 ntBASIC1.15□□□□□ -2.23
CDH1P12830 AP001328.1-201ENST00000528550 176 ntBASIC1.15□□□□□ -2.23
CDH1P12830 snoU13.31-201ENST00000607291 104 ntBASIC1.15□□□□□ -2.23
CDH1P12830 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
CDH1P12830 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CDH1P12830 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.15□□□□□ -2.23
CDH1P12830 MIR302B-201ENST00000362188 73 ntBASIC1.14□□□□□ -2.23
CDH1P12830 SNORD18B-201ENST00000365659 72 ntBASIC1.14□□□□□ -2.23
CDH1P12830 RNY1P6-201ENST00000384193 109 ntBASIC1.14□□□□□ -2.23
CDH1P12830 RNU6-257P-201ENST00000410238 98 ntBASIC1.14□□□□□ -2.23
CDH1P12830 MTND4LP9-201ENST00000427694 174 ntBASIC1.14□□□□□ -2.23
CDH1P12830 HMGN1P33-201ENST00000432945 451 ntBASIC1.14□□□□□ -2.23
CDH1P12830 MIR3121-201ENST00000579680 77 ntBASIC1.14□□□□□ -2.23
CDH1P12830 HSPE1P19-201ENST00000603327 295 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms