Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 PCNPP3-201ENST00000393579 471 ntBASIC1.15□□□□□ -2.23
PCNAP12004 RNU6-588P-201ENST00000410281 105 ntBASIC1.15□□□□□ -2.23
PCNAP12004 RNU6-1135P-201ENST00000411083 103 ntBASIC1.15□□□□□ -2.23
PCNAP12004 AP1B1P2-201ENST00000416196 106 ntBASIC1.15□□□□□ -2.23
PCNAP12004 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
PCNAP12004 RNU7-96P-201ENST00000459535 64 ntBASIC1.15□□□□□ -2.23
PCNAP12004 RNU6-1149P-201ENST00000516810 97 ntBASIC1.15□□□□□ -2.23
PCNAP12004 AC023827.1-201ENST00000569247 97 ntBASIC1.15□□□□□ -2.23
PCNAP12004 SEPT14P17-201ENST00000617978 177 ntBASIC1.15□□□□□ -2.23
PCNAP12004 FTX_2.1-201ENST00000618816 94 ntBASIC1.15□□□□□ -2.23
PCNAP12004 RNU6-818P-201ENST00000364837 108 ntBASIC1.14□□□□□ -2.23
PCNAP12004 MIR624-201ENST00000385217 97 ntBASIC1.14□□□□□ -2.23
PCNAP12004 RNU2-64P-201ENST00000411315 191 ntBASIC1.14□□□□□ -2.23
PCNAP12004 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
PCNAP12004 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
PCNAP12004 snoU13.16-201ENST00000459350 104 ntBASIC1.14□□□□□ -2.23
PCNAP12004 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
PCNAP12004 SCARNA15-202ENST00000516881 127 ntBASIC1.14□□□□□ -2.23
PCNAP12004 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
PCNAP12004 AC091932.4-201ENST00000623386 200 ntBASIC1.14□□□□□ -2.23
PCNAP12004 MTND5P32-201ENST00000560711 1802 ntBASIC1.14□□□□□ -2.23
PCNAP12004 AL596211.1-201ENST00000569873 2277 ntBASIC1.14□□□□□ -2.23
PCNAP12004 AL391516.1-201ENST00000554380 2449 ntBASIC1.14□□□□□ -2.23
PCNAP12004 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PCNAP12004 Y_RNA.270-201ENST00000364693 104 ntBASIC1.13□□□□□ -2.23
PCNAP12004 Y_RNA.272-201ENST00000364696 102 ntBASIC1.13□□□□□ -2.23
PCNAP12004 RNU6-1130P-201ENST00000365434 107 ntBASIC1.13□□□□□ -2.23
PCNAP12004 Y_RNA.441-201ENST00000384123 112 ntBASIC1.13□□□□□ -2.23
PCNAP12004 RNU6-125P-201ENST00000384505 107 ntBASIC1.13□□□□□ -2.23
PCNAP12004 MIR548I3-201ENST00000408378 149 ntBASIC1.13□□□□□ -2.23
PCNAP12004 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
PCNAP12004 AC063976.4-201ENST00000421971 163 ntBASIC1.13□□□□□ -2.23
PCNAP12004 RNU7-73P-201ENST00000458743 63 ntBASIC1.13□□□□□ -2.23
PCNAP12004 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.13□□□□□ -2.23
PCNAP12004 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
PCNAP12004 AC005840.1-201ENST00000498412 377 ntBASIC1.13□□□□□ -2.23
PCNAP12004 RNU7-53P-201ENST00000516705 60 ntBASIC1.13□□□□□ -2.23
PCNAP12004 MIR6844-201ENST00000637122 62 ntBASIC1.13□□□□□ -2.23
PCNAP12004 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PCNAP12004 Y_RNA.8-201ENST00000362353 102 ntBASIC1.12□□□□□ -2.23
PCNAP12004 Y_RNA.52-201ENST00000362760 96 ntBASIC1.12□□□□□ -2.23
PCNAP12004 RNU6-886P-201ENST00000384319 105 ntBASIC1.12□□□□□ -2.23
PCNAP12004 RNU6-907P-201ENST00000390924 102 ntBASIC1.12□□□□□ -2.23
PCNAP12004 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.12□□□□□ -2.23
PCNAP12004 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
PCNAP12004 RNU7-121P-201ENST00000516604 62 ntBASIC1.12□□□□□ -2.23
PCNAP12004 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
PCNAP12004 AL020996.3-201ENST00000606617 222 ntBASIC1.12□□□□□ -2.23
PCNAP12004 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PCNAP12004 MIR302B-201ENST00000362188 73 ntBASIC1.11□□□□□ -2.23
PCNAP12004 RNU6-804P-201ENST00000384286 107 ntBASIC1.11□□□□□ -2.23
PCNAP12004 RNU6-205P-201ENST00000390858 107 ntBASIC1.11□□□□□ -2.23
PCNAP12004 SNORD37.2-201ENST00000391075 66 ntBASIC1.11□□□□□ -2.23
PCNAP12004 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.11□□□□□ -2.23
PCNAP12004 MIR4769-201ENST00000584126 77 ntBASIC1.11□□□□□ -2.23
PCNAP12004 MIR8055-201ENST00000610739 97 ntBASIC1.11□□□□□ -2.23
PCNAP12004 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
PCNAP12004 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
PCNAP12004 RNU6-396P-201ENST00000365369 105 ntBASIC1.1□□□□□ -2.23
PCNAP12004 SNORA75.5-201ENST00000391291 81 ntBASIC1.1□□□□□ -2.23
PCNAP12004 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
PCNAP12004 SNORD124-201ENST00000459577 104 ntBASIC1.1□□□□□ -2.23
PCNAP12004 RNA5SP458-201ENST00000516188 119 ntBASIC1.1□□□□□ -2.23
PCNAP12004 MIR2115-201ENST00000516657 100 ntBASIC1.1□□□□□ -2.23
PCNAP12004 MIR3668-201ENST00000582138 75 ntBASIC1.1□□□□□ -2.23
PCNAP12004 MIR4781-201ENST00000585250 76 ntBASIC1.1□□□□□ -2.23
PCNAP12004 DNAJC19P2-201ENST00000593340 302 ntBASIC1.1□□□□□ -2.23
PCNAP12004 RNU6-94P-201ENST00000607728 107 ntBASIC1.1□□□□□ -2.23
PCNAP12004 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.1□□□□□ -2.23
PCNAP12004 RNU4-16P-201ENST00000364737 141 ntBASIC1.09□□□□□ -2.23
PCNAP12004 RNU4-11P-201ENST00000365287 132 ntBASIC1.09□□□□□ -2.23
PCNAP12004 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
PCNAP12004 SNORD116-18-201ENST00000383961 92 ntBASIC1.09□□□□□ -2.23
PCNAP12004 SNORA2B-201ENST00000384583 137 ntBASIC1.09□□□□□ -2.23
PCNAP12004 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.23
PCNAP12004 SNORD12-201ENST00000391002 90 ntBASIC1.09□□□□□ -2.23
PCNAP12004 AC244023.1-201ENST00000426884 112 ntBASIC1.09□□□□□ -2.23
PCNAP12004 RNU7-80P-201ENST00000459562 61 ntBASIC1.09□□□□□ -2.23
PCNAP12004 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
PCNAP12004 RNU11-2P-201ENST00000516898 142 ntBASIC1.09□□□□□ -2.23
PCNAP12004 AC036111.3-201ENST00000526389 112 ntBASIC1.09□□□□□ -2.23
PCNAP12004 AC131055.1-201ENST00000584626 316 ntBASIC1.09□□□□□ -2.23
PCNAP12004 AC242498.1-201ENST00000604134 111 ntBASIC1.09□□□□□ -2.23
PCNAP12004 RNU6-151P-201ENST00000364158 107 ntBASIC1.08□□□□□ -2.24
PCNAP12004 SNORA1.1-201ENST00000364671 133 ntBASIC1.08□□□□□ -2.24
PCNAP12004 RNU1-133P-201ENST00000364867 167 ntBASIC1.08□□□□□ -2.24
PCNAP12004 Y_RNA.497-201ENST00000384447 98 ntBASIC1.08□□□□□ -2.24
PCNAP12004 SNORA26.6-201ENST00000391256 115 ntBASIC1.08□□□□□ -2.24
PCNAP12004 RNU6-613P-201ENST00000410412 108 ntBASIC1.08□□□□□ -2.24
PCNAP12004 RNU6-394P-201ENST00000410735 107 ntBASIC1.08□□□□□ -2.24
PCNAP12004 UBL5P1-201ENST00000507979 193 ntBASIC1.08□□□□□ -2.24
PCNAP12004 RNU7-70P-201ENST00000516941 66 ntBASIC1.08□□□□□ -2.24
PCNAP12004 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.08□□□□□ -2.24
PCNAP12004 AC098479.1-201ENST00000609225 154 ntBASIC1.08□□□□□ -2.24
PCNAP12004 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.08□□□□□ -2.24
PCNAP12004 Z97988.1-201ENST00000637697 135 ntBASIC1.08□□□□□ -2.24
PCNAP12004 RNU6-508P-201ENST00000363231 103 ntBASIC1.07□□□□□ -2.24
PCNAP12004 Y_RNA.398-201ENST00000383952 99 ntBASIC1.07□□□□□ -2.24
PCNAP12004 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
PCNAP12004 RNU6-602P-201ENST00000411155 105 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms