Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
RETP07949 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.58□□□□□ -2.32
RETP07949 RNU6-1309P-201ENST00000363305 108 ntBASIC0.58□□□□□ -2.32
RETP07949 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
RETP07949 Y_RNA.241-201ENST00000364470 117 ntBASIC0.58□□□□□ -2.32
RETP07949 Y_RNA.280-201ENST00000364765 112 ntBASIC0.58□□□□□ -2.32
RETP07949 RNU6-396P-201ENST00000365369 105 ntBASIC0.58□□□□□ -2.32
RETP07949 SNORD61-201ENST00000384252 73 ntBASIC0.58□□□□□ -2.32
RETP07949 MIR518F-201ENST00000384973 87 ntBASIC0.58□□□□□ -2.32
RETP07949 MIR616-201ENST00000385293 97 ntBASIC0.58□□□□□ -2.32
RETP07949 SNORA26-201ENST00000391286 122 ntBASIC0.58□□□□□ -2.32
RETP07949 FABP5P4-201ENST00000437203 171 ntBASIC0.58□□□□□ -2.32
RETP07949 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.58□□□□□ -2.32
RETP07949 RNU6-327P-201ENST00000516270 127 ntBASIC0.58□□□□□ -2.32
RETP07949 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.58□□□□□ -2.32
RETP07949 MIR548AO-201ENST00000579992 96 ntBASIC0.58□□□□□ -2.32
RETP07949 AL353765.1-201ENST00000605514 183 ntBASIC0.58□□□□□ -2.32
RETP07949 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.58□□□□□ -2.32
RETP07949 MIR2909-201ENST00000617113 69 ntBASIC0.58□□□□□ -2.32
RETP07949 AL365265.1-201ENST00000621045 234 ntBASIC0.58□□□□□ -2.32
RETP07949 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RETP07949 Y_RNA.37-201ENST00000362606 108 ntBASIC0.57□□□□□ -2.32
RETP07949 RNU6-888P-201ENST00000363010 101 ntBASIC0.57□□□□□ -2.32
RETP07949 snoU2_19.4-201ENST00000364329 80 ntBASIC0.57□□□□□ -2.32
RETP07949 SNORD113.3-201ENST00000364630 78 ntBASIC0.57□□□□□ -2.32
RETP07949 Y_RNA.288-201ENST00000364854 92 ntBASIC0.57□□□□□ -2.32
RETP07949 SNORA24-201ENST00000384096 131 ntBASIC0.57□□□□□ -2.32
RETP07949 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
RETP07949 MT-TT-201ENST00000387460 66 ntBASIC0.57□□□□□ -2.32
RETP07949 SNORD111-201ENST00000408139 94 ntBASIC0.57□□□□□ -2.32
RETP07949 RNU6-613P-201ENST00000410412 108 ntBASIC0.57□□□□□ -2.32
RETP07949 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
RETP07949 RNU6-938P-201ENST00000411285 103 ntBASIC0.57□□□□□ -2.32
RETP07949 MTND2P23-201ENST00000422990 651 ntBASIC0.57□□□□□ -2.32
RETP07949 AC015818.7-201ENST00000428754 109 ntBASIC0.57□□□□□ -2.32
RETP07949 AC087499.7-201ENST00000441958 109 ntBASIC0.57□□□□□ -2.32
RETP07949 SNRPGP8-201ENST00000454064 226 ntBASIC0.57□□□□□ -2.32
RETP07949 SNORD127-201ENST00000458892 86 ntBASIC0.57□□□□□ -2.32
RETP07949 RNU7-67P-201ENST00000459003 62 ntBASIC0.57□□□□□ -2.32
RETP07949 snoU13.16-201ENST00000459350 104 ntBASIC0.57□□□□□ -2.32
RETP07949 snoU13.21-201ENST00000459368 105 ntBASIC0.57□□□□□ -2.32
RETP07949 RNA5SP153-201ENST00000516498 76 ntBASIC0.57□□□□□ -2.32
RETP07949 RNU6-453P-201ENST00000516819 85 ntBASIC0.57□□□□□ -2.32
RETP07949 RNU6-1270P-201ENST00000517128 108 ntBASIC0.57□□□□□ -2.32
RETP07949 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
RETP07949 AC243829.6-201ENST00000612652 106 ntBASIC0.57□□□□□ -2.32
RETP07949 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
RETP07949 Y_RNA.54-201ENST00000362766 105 ntBASIC0.56□□□□□ -2.32
RETP07949 Y_RNA.133-201ENST00000363428 110 ntBASIC0.56□□□□□ -2.32
RETP07949 Y_RNA.277-201ENST00000364754 102 ntBASIC0.56□□□□□ -2.32
RETP07949 Y_RNA.634-201ENST00000364811 113 ntBASIC0.56□□□□□ -2.32
RETP07949 Y_RNA.416-201ENST00000384014 113 ntBASIC0.56□□□□□ -2.32
RETP07949 RNU6-484P-201ENST00000384016 107 ntBASIC0.56□□□□□ -2.32
RETP07949 Y_RNA.432-201ENST00000384087 111 ntBASIC0.56□□□□□ -2.32
RETP07949 Y_RNA.556-201ENST00000384677 113 ntBASIC0.56□□□□□ -2.32
RETP07949 MIR548A2-201ENST00000384956 97 ntBASIC0.56□□□□□ -2.32
RETP07949 RNU6-1228P-201ENST00000391014 107 ntBASIC0.56□□□□□ -2.32
RETP07949 SNORA40.5-201ENST00000391061 128 ntBASIC0.56□□□□□ -2.32
RETP07949 AL606845.1-201ENST00000404881 255 ntBASIC0.56□□□□□ -2.32
RETP07949 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
RETP07949 MIR548H3-201ENST00000408771 118 ntBASIC0.56□□□□□ -2.32
RETP07949 Y_RNA.622-201ENST00000411091 108 ntBASIC0.56□□□□□ -2.32
RETP07949 MIR4643-201ENST00000577473 78 ntBASIC0.56□□□□□ -2.32
RETP07949 AP000942.4-201ENST00000604811 241 ntBASIC0.56□□□□□ -2.32
RETP07949 AC134878.1-201ENST00000619901 243 ntBASIC0.56□□□□□ -2.32
RETP07949 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
RETP07949 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.55□□□□□ -2.32
RETP07949 Y_RNA.66-201ENST00000362862 102 ntBASIC0.55□□□□□ -2.32
RETP07949 Y_RNA.91-201ENST00000363042 107 ntBASIC0.55□□□□□ -2.32
RETP07949 RNU6-653P-201ENST00000363074 106 ntBASIC0.55□□□□□ -2.32
RETP07949 Y_RNA.162-201ENST00000363683 102 ntBASIC0.55□□□□□ -2.32
RETP07949 Y_RNA.199-201ENST00000364014 102 ntBASIC0.55□□□□□ -2.32
RETP07949 Y_RNA.262-201ENST00000364641 102 ntBASIC0.55□□□□□ -2.32
RETP07949 VTRNA1-3-201ENST00000365645 89 ntBASIC0.55□□□□□ -2.32
RETP07949 SNORA27-201ENST00000384323 126 ntBASIC0.55□□□□□ -2.32
RETP07949 SNORA2B-201ENST00000384583 137 ntBASIC0.55□□□□□ -2.32
RETP07949 RNU6-381P-201ENST00000391259 108 ntBASIC0.55□□□□□ -2.32
RETP07949 MIR1302-3-201ENST00000408128 138 ntBASIC0.55□□□□□ -2.32
RETP07949 RNU2-38P-201ENST00000410856 79 ntBASIC0.55□□□□□ -2.32
RETP07949 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.55□□□□□ -2.32
RETP07949 AC090844.1-201ENST00000422019 156 ntBASIC0.55□□□□□ -2.32
RETP07949 MTCYBP9-201ENST00000431021 303 ntBASIC0.55□□□□□ -2.32
RETP07949 U7.7-201ENST00000459276 60 ntBASIC0.55□□□□□ -2.32
RETP07949 RNU6-1045P-201ENST00000516321 107 ntBASIC0.55□□□□□ -2.32
RETP07949 SCARNA15.1-201ENST00000516384 125 ntBASIC0.55□□□□□ -2.32
RETP07949 SNORA18.4-201ENST00000516440 124 ntBASIC0.55□□□□□ -2.32
RETP07949 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
RETP07949 SNORD36C-201ENST00000516733 66 ntBASIC0.55□□□□□ -2.32
RETP07949 RNU6-958P-201ENST00000516995 106 ntBASIC0.55□□□□□ -2.32
RETP07949 MIR4719-201ENST00000585233 84 ntBASIC0.55□□□□□ -2.32
RETP07949 AC104465.1-201ENST00000611365 139 ntBASIC0.55□□□□□ -2.32
RETP07949 AL442067.1-201ENST00000613261 223 ntBASIC0.55□□□□□ -2.32
RETP07949 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
RETP07949 Y_RNA.76-201ENST00000362931 109 ntBASIC0.54□□□□□ -2.32
RETP07949 Y_RNA.168-201ENST00000363740 102 ntBASIC0.54□□□□□ -2.32
RETP07949 SNORD45.3-201ENST00000363836 72 ntBASIC0.54□□□□□ -2.32
RETP07949 Y_RNA.292-201ENST00000364904 97 ntBASIC0.54□□□□□ -2.32
RETP07949 RNU4-17P-201ENST00000365598 141 ntBASIC0.54□□□□□ -2.32
RETP07949 RNU6-110P-201ENST00000384508 104 ntBASIC0.54□□□□□ -2.32
RETP07949 Y_RNA.562-201ENST00000384695 113 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms