Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.68□□□□□ -2.52
HLA-DQB2P05538 MIR4263-201ENST00000584745 83 ntBASIC-0.68□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 SNORA8.3-201ENST00000384679 139 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 RNU6-21P-201ENST00000384710 107 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 MIR196A2-201ENST00000385189 110 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 MTND1P29-201ENST00000448112 647 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 RNU7-104P-201ENST00000459398 79 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 RNU6-531P-201ENST00000516694 104 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 AL360085.1-201ENST00000604713 532 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 MIR548AZ-201ENST00000616567 95 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 AC084368.1-201ENST00000620935 65 ntBASIC-0.69□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 SNORA1-201ENST00000384107 130 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 AC244505.6-201ENST00000452829 130 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 RNU6-365P-201ENST00000517113 106 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 AP001180.6-201ENST00000584918 159 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 MIR8064-201ENST00000612863 90 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 AC073869.9-201ENST00000641610 120 ntBASIC-0.7□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 RNU6-811P-201ENST00000384069 107 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 RNU6-890P-201ENST00000384121 107 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 SNORD63-201ENST00000384262 68 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 RNU6-310P-201ENST00000384655 107 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 RNU6-763P-201ENST00000390865 106 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 RNU4-14P-201ENST00000410858 122 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 MTATP6P17-201ENST00000431030 672 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 RNU7-161P-201ENST00000517289 62 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.71□□□□□ -2.52
HLA-DQB2P05538 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 MIR655-201ENST00000362159 97 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 MIR367-201ENST00000362299 68 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 RNU6-937P-201ENST00000384325 106 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 RNU6-284P-201ENST00000411105 106 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 AC244250.2-201ENST00000418731 148 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 MTND4P19-201ENST00000446659 478 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 RNU6-191P-201ENST00000516295 94 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 RNU6-126P-201ENST00000516685 103 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 AP003733.2-201ENST00000529409 171 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 AC105081.1-201ENST00000617727 106 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 MIR6841-201ENST00000637129 72 ntBASIC-0.72□□□□□ -2.52
HLA-DQB2P05538 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 SNORD114-11-201ENST00000363738 75 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 RNU6-702P-201ENST00000364982 107 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 RNY1P13-201ENST00000365030 105 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 RNU6-480P-201ENST00000384332 107 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 SNORD116-1-201ENST00000384335 95 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 SNORA18-201ENST00000384416 132 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 MIR626-201ENST00000385032 94 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 SNORD41.1-201ENST00000391000 69 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 SNORD110-201ENST00000408189 75 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 RNU6-370P-201ENST00000411008 104 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 AC006210.1-201ENST00000424882 111 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 MTND4P17-201ENST00000470444 350 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 AC114755.3-201ENST00000481111 251 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 MIR4802-201ENST00000581881 80 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 VN1R91P-201ENST00000594377 169 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 AC103591.3-201ENST00000608684 209 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 AP000770.2-201ENST00000623694 100 ntBASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.73□□□□□ -2.53
HLA-DQB2P05538 MIR101-2-201ENST00000362195 79 ntBASIC-0.74□□□□□ -2.53
HLA-DQB2P05538 RNU4-58P-201ENST00000363192 141 ntBASIC-0.74□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.74□□□□□ -2.53
HLA-DQB2P05538 RNY3-201ENST00000365484 102 ntBASIC-0.74□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.74□□□□□ -2.53
HLA-DQB2P05538 MTCO2P24-201ENST00000515611 426 ntBASIC-0.74□□□□□ -2.53
HLA-DQB2P05538 RNU6-397P-201ENST00000516226 104 ntBASIC-0.74□□□□□ -2.53
HLA-DQB2P05538 AC048344.4-201ENST00000619744 527 ntBASIC-0.74□□□□□ -2.53
HLA-DQB2P05538 RNA5SP133-201ENST00000363368 119 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 MIR516B1-201ENST00000385211 90 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 MTND4LP11-201ENST00000422184 280 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 BX276092.1-201ENST00000427368 251 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 NAMPTP3-201ENST00000569273 224 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 MIR4724-201ENST00000579485 89 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 AC013791.1-201ENST00000616619 62 ntBASIC-0.75□□□□□ -2.53
HLA-DQB2P05538 MIR101-1-201ENST00000362265 75 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 RNA5SP403-201ENST00000363598 108 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 SNORA20-201ENST00000384662 132 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 MIR1912-201ENST00000410389 80 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 MTND1P14-201ENST00000427400 950 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 AC099799.1-201ENST00000439809 192 ntBASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.76□□□□□ -2.53
HLA-DQB2P05538 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms