Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU2-70P-201ENST00000410718 179 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-860P-201ENST00000410860 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-1217P-201ENST00000411276 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-785P-201ENST00000411324 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 MTATP6P23-201ENST00000440153 476 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 AL731563.1-201ENST00000442202 214 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 MTND4LP30-201ENST00000454092 297 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.2□□□□□ -2.38
HLA-DPB1P04440 SNORA25.12-201ENST00000516202 82 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 AC113195.1-201ENST00000579952 141 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 AC037487.3-201ENST00000606668 112 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 U6.90-201ENST00000614007 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 U6.70-201ENST00000620287 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 PVT1_3.1-201ENST00000620853 95 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 MIR376A2-201ENST00000636782 80 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 AL589743.1-201ENST00000551932 2712 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 UBE2WP1-201ENST00000362030 340 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.84-201ENST00000363011 104 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.117-201ENST00000363294 101 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.634-201ENST00000364811 113 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.455-201ENST00000384230 98 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 MT-TT-201ENST00000387460 66 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 SNORD77.3-201ENST00000391113 65 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 SNORA26.6-201ENST00000391256 115 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 RNU7-96P-201ENST00000459535 64 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 RNU6-504P-201ENST00000516568 104 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 SCARNA24.2-201ENST00000516968 130 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 RNU6-988P-201ENST00000519081 107 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 AP003733.2-201ENST00000529409 171 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 AL160413.1-201ENST00000622780 310 ntBASIC0.19□□□□□ -2.38
HLA-DPB1P04440 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.19□□□□□ -2.38
HLA-DPB1P04440 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HLA-DPB1P04440 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 MIR342-201ENST00000362212 99 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.152-201ENST00000363578 100 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.276-201ENST00000364732 109 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 RNU6-597P-201ENST00000365620 102 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 RNU6-1189P-201ENST00000383958 107 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 SNORA1-201ENST00000384107 130 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 RNU6-1289P-201ENST00000384431 106 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 SNORA8.3-201ENST00000384679 139 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 MIR489-201ENST00000384923 84 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 MIR626-201ENST00000385032 94 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.617-201ENST00000410920 90 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 SNORA40.8-201ENST00000411034 126 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 AC022028.1-201ENST00000412054 408 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.711-201ENST00000516993 102 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 MIR3678-201ENST00000578455 94 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 AP001282.2-201ENST00000616149 309 ntBASIC0.18□□□□□ -2.38
HLA-DPB1P04440 RNU6-740P-201ENST00000364734 105 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.304-201ENST00000365011 112 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 SNORA8.2-201ENST00000384372 139 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 MT-TF-201ENST00000387314 71 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 RNU6-1228P-201ENST00000391014 107 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.622-201ENST00000411091 108 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 SNRPGP8-201ENST00000454064 226 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 SERF1AP1-201ENST00000514575 187 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 RNU6-1299P-201ENST00000516316 100 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 RNU6-448P-201ENST00000517052 107 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 AC022523.2-201ENST00000561045 150 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 AC133485.4-201ENST00000561835 220 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.17□□□□□ -2.38
HLA-DPB1P04440 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 MIR5688-201ENST00000580619 83 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 MIR8066-201ENST00000617280 78 ntBASIC0.17□□□□□ -2.38
HLA-DPB1P04440 SNORA36.1-201ENST00000363424 132 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.153-201ENST00000363615 91 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.158-201ENST00000363651 101 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 snoU2_19.4-201ENST00000364329 80 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.275-201ENST00000364726 110 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 RNU6-651P-201ENST00000411040 105 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 SNORD71-201ENST00000411292 86 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.16□□□□□ -2.38
HLA-DPB1P04440 RNU6-1338P-201ENST00000516328 91 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 RNU6-126P-201ENST00000516685 103 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 RNU6-453P-201ENST00000516819 85 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 RNU6-1137P-201ENST00000517073 99 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 MIR4680-201ENST00000580906 66 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 AC078938.1-201ENST00000620993 318 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 MIR6717-201ENST00000622747 73 ntBASIC0.16□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.23-201ENST00000362496 106 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 Y_RNA.128-201ENST00000363391 112 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 RNA5SP62-201ENST00000363457 110 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 RNA5SP117-201ENST00000365294 118 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 Y_RNA.410-201ENST00000383992 113 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 Y_RNA.567-201ENST00000384736 106 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.15□□□□□ -2.39
HLA-DPB1P04440 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.15□□□□□ -2.39
HLA-DPB1P04440 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.15□□□□□ -2.39
HLA-DPB1P04440 AC097639.2-201ENST00000603159 172 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 AC134503.1-201ENST00000633048 54 ntBASIC0.15□□□□□ -2.39
HLA-DPB1P04440 Y_RNA.42-201ENST00000362660 108 ntBASIC0.14□□□□□ -2.39
HLA-DPB1P04440 Y_RNA.432-201ENST00000384087 111 ntBASIC0.14□□□□□ -2.39
HLA-DPB1P04440 RNY1P4-201ENST00000384595 115 ntBASIC0.14□□□□□ -2.39
HLA-DPB1P04440 MIR548P-201ENST00000408336 84 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms