Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 AC104465.1-201ENST00000611365 139 ntBASIC0.62□□□□□ -2.31
MMP1P03956 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
MMP1P03956 Y_RNA.241-201ENST00000364470 117 ntBASIC0.61□□□□□ -2.31
MMP1P03956 Y_RNA.277-201ENST00000364754 102 ntBASIC0.61□□□□□ -2.31
MMP1P03956 Y_RNA.634-201ENST00000364811 113 ntBASIC0.61□□□□□ -2.31
MMP1P03956 Y_RNA.352-201ENST00000365439 102 ntBASIC0.61□□□□□ -2.31
MMP1P03956 Y_RNA.416-201ENST00000384014 113 ntBASIC0.61□□□□□ -2.31
MMP1P03956 MIR616-201ENST00000385293 97 ntBASIC0.61□□□□□ -2.31
MMP1P03956 RNU6-913P-201ENST00000390913 95 ntBASIC0.61□□□□□ -2.31
MMP1P03956 RPS26P5-201ENST00000418544 335 ntBASIC0.61□□□□□ -2.31
MMP1P03956 MTND2P23-201ENST00000422990 651 ntBASIC0.61□□□□□ -2.31
MMP1P03956 AF228730.3-201ENST00000436691 102 ntBASIC0.61□□□□□ -2.31
MMP1P03956 SNORD127-201ENST00000458892 86 ntBASIC0.61□□□□□ -2.31
MMP1P03956 MTND1P19-201ENST00000511780 315 ntBASIC0.61□□□□□ -2.31
MMP1P03956 RNU6-561P-201ENST00000516222 102 ntBASIC0.61□□□□□ -2.31
MMP1P03956 Y_RNA.681-201ENST00000516445 113 ntBASIC0.61□□□□□ -2.31
MMP1P03956 MIR2115-201ENST00000516657 100 ntBASIC0.61□□□□□ -2.31
MMP1P03956 RNU6-365P-201ENST00000517113 106 ntBASIC0.61□□□□□ -2.31
MMP1P03956 AC097639.2-201ENST00000603159 172 ntBASIC0.61□□□□□ -2.31
MMP1P03956 AP000942.4-201ENST00000604811 241 ntBASIC0.61□□□□□ -2.31
MMP1P03956 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.6□□□□□ -2.31
MMP1P03956 RNA5SP257-201ENST00000363023 116 ntBASIC0.6□□□□□ -2.31
MMP1P03956 SNORD113.3-201ENST00000364630 78 ntBASIC0.6□□□□□ -2.31
MMP1P03956 RNY3P5-201ENST00000384127 102 ntBASIC0.6□□□□□ -2.31
MMP1P03956 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
MMP1P03956 Y_RNA.562-201ENST00000384695 113 ntBASIC0.6□□□□□ -2.31
MMP1P03956 RNU6-1067P-201ENST00000384752 107 ntBASIC0.6□□□□□ -2.31
MMP1P03956 AL606845.1-201ENST00000404881 255 ntBASIC0.6□□□□□ -2.31
MMP1P03956 Y_RNA.622-201ENST00000411091 108 ntBASIC0.6□□□□□ -2.31
MMP1P03956 RNU2-55P-201ENST00000411146 174 ntBASIC0.6□□□□□ -2.31
MMP1P03956 MTCYBP9-201ENST00000431021 303 ntBASIC0.6□□□□□ -2.31
MMP1P03956 HMGN1P33-201ENST00000432945 451 ntBASIC0.6□□□□□ -2.31
MMP1P03956 AC087499.4-201ENST00000448505 178 ntBASIC0.6□□□□□ -2.31
MMP1P03956 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
MMP1P03956 RNU6-327P-201ENST00000516270 127 ntBASIC0.6□□□□□ -2.31
MMP1P03956 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
MMP1P03956 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
MMP1P03956 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.6□□□□□ -2.31
MMP1P03956 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
MMP1P03956 MIR376A2-201ENST00000636782 80 ntBASIC0.6□□□□□ -2.31
MMP1P03956 U6.104-201ENST00000637979 90 ntBASIC0.6□□□□□ -2.31
MMP1P03956 AC023934.1-201ENST00000574529 2389 ntBASIC0.59□□□□□ -2.31
MMP1P03956 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
MMP1P03956 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
MMP1P03956 Y_RNA.23-201ENST00000362496 106 ntBASIC0.59□□□□□ -2.31
MMP1P03956 RNU6-369P-201ENST00000362515 102 ntBASIC0.59□□□□□ -2.31
MMP1P03956 Y_RNA.149-201ENST00000363558 117 ntBASIC0.59□□□□□ -2.31
MMP1P03956 Y_RNA.168-201ENST00000363740 102 ntBASIC0.59□□□□□ -2.31
MMP1P03956 RNU6-580P-201ENST00000365159 107 ntBASIC0.59□□□□□ -2.31
MMP1P03956 RNU6-396P-201ENST00000365369 105 ntBASIC0.59□□□□□ -2.31
MMP1P03956 RNU6-1228P-201ENST00000391014 107 ntBASIC0.59□□□□□ -2.31
MMP1P03956 SNORA40.5-201ENST00000391061 128 ntBASIC0.59□□□□□ -2.31
MMP1P03956 SNORD111-201ENST00000408139 94 ntBASIC0.59□□□□□ -2.31
MMP1P03956 AC244023.1-201ENST00000426884 112 ntBASIC0.59□□□□□ -2.31
MMP1P03956 U7.7-201ENST00000459276 60 ntBASIC0.59□□□□□ -2.31
MMP1P03956 snoU13.21-201ENST00000459368 105 ntBASIC0.59□□□□□ -2.31
MMP1P03956 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
MMP1P03956 Y_RNA.668-201ENST00000516233 93 ntBASIC0.59□□□□□ -2.31
MMP1P03956 RNU6-1299P-201ENST00000516316 100 ntBASIC0.59□□□□□ -2.31
MMP1P03956 Y_RNA.679-201ENST00000516416 91 ntBASIC0.59□□□□□ -2.31
MMP1P03956 RNA5SP153-201ENST00000516498 76 ntBASIC0.59□□□□□ -2.31
MMP1P03956 RNU6-504P-201ENST00000516568 104 ntBASIC0.59□□□□□ -2.31
MMP1P03956 AC025627.3-201ENST00000582078 182 ntBASIC0.59□□□□□ -2.31
MMP1P03956 AC242498.1-201ENST00000604134 111 ntBASIC0.59□□□□□ -2.31
MMP1P03956 AL442067.1-201ENST00000613261 223 ntBASIC0.59□□□□□ -2.31
MMP1P03956 Y_RNA.292-201ENST00000364904 97 ntBASIC0.58□□□□□ -2.32
MMP1P03956 Y_RNA.432-201ENST00000384087 111 ntBASIC0.58□□□□□ -2.32
MMP1P03956 SNORA1-201ENST00000384107 130 ntBASIC0.58□□□□□ -2.32
MMP1P03956 SNORA27-201ENST00000384323 126 ntBASIC0.58□□□□□ -2.32
MMP1P03956 SNORA2B-201ENST00000384583 137 ntBASIC0.58□□□□□ -2.32
MMP1P03956 MT-TN-201ENST00000387400 73 ntBASIC0.58□□□□□ -2.32
MMP1P03956 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
MMP1P03956 snoU13.16-201ENST00000459350 104 ntBASIC0.58□□□□□ -2.32
MMP1P03956 RNU6-958P-201ENST00000516995 106 ntBASIC0.58□□□□□ -2.32
MMP1P03956 MIR8055-201ENST00000610739 97 ntBASIC0.58□□□□□ -2.32
MMP1P03956 MIR377-201ENST00000362145 69 ntBASIC0.57□□□□□ -2.32
MMP1P03956 Y_RNA.54-201ENST00000362766 105 ntBASIC0.57□□□□□ -2.32
MMP1P03956 Y_RNA.68-201ENST00000362881 102 ntBASIC0.57□□□□□ -2.32
MMP1P03956 Y_RNA.539-201ENST00000384635 107 ntBASIC0.57□□□□□ -2.32
MMP1P03956 RNU6-205P-201ENST00000390858 107 ntBASIC0.57□□□□□ -2.32
MMP1P03956 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
MMP1P03956 SNORD58.1-201ENST00000391313 66 ntBASIC0.57□□□□□ -2.32
MMP1P03956 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
MMP1P03956 RNA5SP127-201ENST00000411051 133 ntBASIC0.57□□□□□ -2.32
MMP1P03956 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
MMP1P03956 RNU7-73P-201ENST00000458743 63 ntBASIC0.57□□□□□ -2.32
MMP1P03956 RNU7-67P-201ENST00000459003 62 ntBASIC0.57□□□□□ -2.32
MMP1P03956 AC107297.1-201ENST00000459991 176 ntBASIC0.57□□□□□ -2.32
MMP1P03956 RNY3P16-201ENST00000516338 101 ntBASIC0.57□□□□□ -2.32
MMP1P03956 RNU6-126P-201ENST00000516685 103 ntBASIC0.57□□□□□ -2.32
MMP1P03956 uc_338.6-201ENST00000613544 171 ntBASIC0.57□□□□□ -2.32
MMP1P03956 AC134878.1-201ENST00000619901 243 ntBASIC0.57□□□□□ -2.32
MMP1P03956 Y_RNA.288-201ENST00000364854 92 ntBASIC0.56□□□□□ -2.32
MMP1P03956 RNY4P28-201ENST00000365281 93 ntBASIC0.56□□□□□ -2.32
MMP1P03956 RNU4-17P-201ENST00000365598 141 ntBASIC0.56□□□□□ -2.32
MMP1P03956 Y_RNA.440-201ENST00000384120 114 ntBASIC0.56□□□□□ -2.32
MMP1P03956 SNORD77.3-201ENST00000391113 65 ntBASIC0.56□□□□□ -2.32
MMP1P03956 MIR1827-201ENST00000408549 66 ntBASIC0.56□□□□□ -2.32
MMP1P03956 MIR1197-201ENST00000408818 88 ntBASIC0.56□□□□□ -2.32
MMP1P03956 RNU6-1190P-201ENST00000410811 104 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms