Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.03□□□□□ -2.41
MT-ND4P03905 RNU6-126P-201ENST00000516685 103 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 AP003733.2-201ENST00000529409 171 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 MIR4514-201ENST00000581410 57 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 MIR7107-201ENST00000611489 80 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 RNU4-67P-201ENST00000364569 141 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 RNU6-450P-201ENST00000364654 107 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 SNORA63.7-201ENST00000365579 123 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 MTND4P19-201ENST00000446659 478 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 AC023932.2-201ENST00000603176 175 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 AC104408.1-201ENST00000605241 170 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 AL662814.1-201ENST00000617364 121 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 snoU18.1-201ENST00000629629 71 ntBASIC-0.04□□□□□ -2.42
MT-ND4P03905 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 SNORA25.1-201ENST00000362326 128 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 SNORA9.1-201ENST00000362412 131 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 RNU6-403P-201ENST00000363163 104 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 U8.15-201ENST00000390947 134 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 RNU6-823P-201ENST00000391042 103 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 PCNPP3-201ENST00000393579 471 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.05□□□□□ -2.42
MT-ND4P03905 RPL39P25-201ENST00000449384 154 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 SNORA31.14-201ENST00000516728 116 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 AC006006.1-201ENST00000603082 144 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 MIR6082-201ENST00000613604 109 ntBASIC-0.05□□□□□ -2.42
MT-ND4P03905 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.06□□□□□ -2.42
MT-ND4P03905 MIR302B-201ENST00000362188 73 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 RNU6-653P-201ENST00000363074 106 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 RNU6-326P-201ENST00000365480 107 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 MIR215-201ENST00000384858 110 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 RNA5SP237-201ENST00000410414 113 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 SUMO1P3-201ENST00000439961 304 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 MTND4LP30-201ENST00000454092 297 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 SNORA27.4-201ENST00000516650 95 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 MIR5688-201ENST00000580619 83 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 MIR6828-201ENST00000636181 60 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 MIR376A2-201ENST00000636782 80 ntBASIC-0.06□□□□□ -2.42
MT-ND4P03905 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 RNU6-484P-201ENST00000384016 107 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 RNU6-187P-201ENST00000384139 106 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 RNU6-514P-201ENST00000384208 107 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 SNORA53-201ENST00000391141 249 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 AL731563.1-201ENST00000442202 214 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.07□□□□□ -2.42
MT-ND4P03905 SNORD114-5-201ENST00000362928 70 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 RNY1-201ENST00000364228 113 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 SNORA1-201ENST00000384107 130 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 SNORA8.3-201ENST00000384679 139 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 SNORA26-201ENST00000391286 122 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 MIR1252-201ENST00000408861 65 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 AC096949.1-201ENST00000412047 152 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 RNA5SP227-201ENST00000516184 113 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.08□□□□□ -2.42
MT-ND4P03905 MIR4491-201ENST00000581087 68 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 MIR4795-201ENST00000584182 89 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 AC037487.3-201ENST00000606668 112 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 AC090971.5-201ENST00000621102 293 ntBASIC-0.08□□□□□ -2.42
MT-ND4P03905 MIR369-201ENST00000362155 70 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 MIR626-201ENST00000385032 94 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 RNA5SP261-201ENST00000410536 106 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 RNU2-55P-201ENST00000411146 174 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 RNA5SP47-201ENST00000517230 109 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 AC141846.1-201ENST00000568348 142 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 AL133255.1-201ENST00000606374 441 ntBASIC-0.09□□□□□ -2.42
MT-ND4P03905 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
MT-ND4P03905 RNU4-73P-201ENST00000363164 141 ntBASIC-0.1□□□□□ -2.43
MT-ND4P03905 RNU6-211P-201ENST00000384047 107 ntBASIC-0.1□□□□□ -2.43
MT-ND4P03905 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.1□□□□□ -2.43
MT-ND4P03905 MT-TT-201ENST00000387460 66 ntBASIC-0.1□□□□□ -2.43
MT-ND4P03905 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
MT-ND4P03905 RNU6-127P-201ENST00000390897 107 ntBASIC-0.1□□□□□ -2.43
MT-ND4P03905 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms