Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.04□□□□□ -2.58
APOEP02649 RNU6-383P-201ENST00000410864 94 ntBASIC-1.04□□□□□ -2.58
APOEP02649 AC006210.1-201ENST00000424882 111 ntBASIC-1.04□□□□□ -2.58
APOEP02649 BX276092.1-201ENST00000427368 251 ntBASIC-1.04□□□□□ -2.58
APOEP02649 AF228730.3-201ENST00000436691 102 ntBASIC-1.04□□□□□ -2.58
APOEP02649 RNU6-307P-201ENST00000516743 106 ntBASIC-1.04□□□□□ -2.58
APOEP02649 U6.92-201ENST00000636464 89 ntBASIC-1.04□□□□□ -2.58
APOEP02649 SNORD114-14-201ENST00000362723 75 ntBASIC-1.05□□□□□ -2.58
APOEP02649 U8.6-201ENST00000364939 135 ntBASIC-1.05□□□□□ -2.58
APOEP02649 MIR516B1-201ENST00000385211 90 ntBASIC-1.05□□□□□ -2.58
APOEP02649 RNA5SP261-201ENST00000410536 106 ntBASIC-1.05□□□□□ -2.58
APOEP02649 AL160004.2-201ENST00000432935 350 ntBASIC-1.05□□□□□ -2.58
APOEP02649 AC244505.6-201ENST00000452829 130 ntBASIC-1.05□□□□□ -2.58
APOEP02649 SNORD24-201ENST00000383884 75 ntBASIC-1.06□□□□□ -2.58
APOEP02649 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.06□□□□□ -2.58
APOEP02649 AL360085.1-201ENST00000604713 532 ntBASIC-1.06□□□□□ -2.58
APOEP02649 AC015540.1-201ENST00000615828 501 ntBASIC-1.06□□□□□ -2.58
APOEP02649 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.07□□□□□ -2.58
APOEP02649 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.07□□□□□ -2.58
APOEP02649 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.07□□□□□ -2.58
APOEP02649 RNY1P13-201ENST00000365030 105 ntBASIC-1.07□□□□□ -2.58
APOEP02649 SNORD41.1-201ENST00000391000 69 ntBASIC-1.07□□□□□ -2.58
APOEP02649 SNORA3B-201ENST00000391305 131 ntBASIC-1.07□□□□□ -2.58
APOEP02649 SNORD77.4-201ENST00000516158 81 ntBASIC-1.07□□□□□ -2.58
APOEP02649 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.07□□□□□ -2.58
APOEP02649 AC100767.1-201ENST00000528178 123 ntBASIC-1.07□□□□□ -2.58
APOEP02649 AC099654.14-201ENST00000638599 341 ntBASIC-1.07□□□□□ -2.58
APOEP02649 RNU6-490P-201ENST00000362985 107 ntBASIC-1.08□□□□□ -2.58
APOEP02649 RNU6-888P-201ENST00000363010 101 ntBASIC-1.08□□□□□ -2.58
APOEP02649 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.08□□□□□ -2.58
APOEP02649 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.08□□□□□ -2.58
APOEP02649 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.08□□□□□ -2.58
APOEP02649 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.08□□□□□ -2.58
APOEP02649 SNORA25.13-201ENST00000516395 103 ntBASIC-1.08□□□□□ -2.58
APOEP02649 AC144568.1-201ENST00000520139 137 ntBASIC-1.08□□□□□ -2.58
APOEP02649 AC109635.3-201ENST00000529536 185 ntBASIC-1.08□□□□□ -2.58
APOEP02649 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
APOEP02649 RNA5SP403-201ENST00000363598 108 ntBASIC-1.09□□□□□ -2.58
APOEP02649 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.09□□□□□ -2.58
APOEP02649 RNU7-110P-201ENST00000516891 62 ntBASIC-1.09□□□□□ -2.58
APOEP02649 MIR4662B-201ENST00000579498 81 ntBASIC-1.09□□□□□ -2.58
APOEP02649 AC011373.1-201ENST00000607270 237 ntBASIC-1.09□□□□□ -2.58
APOEP02649 RNU4-58P-201ENST00000363192 141 ntBASIC-1.1□□□□□ -2.59
APOEP02649 RNU4-80P-201ENST00000363200 141 ntBASIC-1.1□□□□□ -2.59
APOEP02649 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.1□□□□□ -2.59
APOEP02649 MIR626-201ENST00000385032 94 ntBASIC-1.1□□□□□ -2.59
APOEP02649 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
APOEP02649 RNA5SP484-201ENST00000458857 111 ntBASIC-1.1□□□□□ -2.59
APOEP02649 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.1□□□□□ -2.59
APOEP02649 RNU7-4P-201ENST00000516961 62 ntBASIC-1.1□□□□□ -2.59
APOEP02649 AL356055.1-201ENST00000602528 446 ntBASIC-1.1□□□□□ -2.59
APOEP02649 U2.1-201ENST00000618978 145 ntBASIC-1.1□□□□□ -2.59
APOEP02649 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.11□□□□□ -2.59
APOEP02649 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.11□□□□□ -2.59
APOEP02649 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.11□□□□□ -2.59
APOEP02649 RNU6-899P-201ENST00000363947 107 ntBASIC-1.11□□□□□ -2.59
APOEP02649 SNORA18-201ENST00000384416 132 ntBASIC-1.11□□□□□ -2.59
APOEP02649 MT-TQ-201ENST00000387372 72 ntBASIC-1.11□□□□□ -2.59
APOEP02649 AC010655.3-201ENST00000478818 450 ntBASIC-1.11□□□□□ -2.59
APOEP02649 RPS29P25-201ENST00000481709 171 ntBASIC-1.11□□□□□ -2.59
APOEP02649 AC063944.3-201ENST00000609969 533 ntBASIC-1.11□□□□□ -2.59
APOEP02649 MTND5P32-201ENST00000560711 1802 ntBASIC-1.12□□□□□ -2.59
APOEP02649 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.12□□□□□ -2.59
APOEP02649 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.12□□□□□ -2.59
APOEP02649 RNA5SP133-201ENST00000363368 119 ntBASIC-1.12□□□□□ -2.59
APOEP02649 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.12□□□□□ -2.59
APOEP02649 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.12□□□□□ -2.59
APOEP02649 RNU6-144P-201ENST00000383951 107 ntBASIC-1.12□□□□□ -2.59
APOEP02649 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.12□□□□□ -2.59
APOEP02649 AC107399.1-201ENST00000451226 265 ntBASIC-1.12□□□□□ -2.59
APOEP02649 RNU6-365P-201ENST00000517113 106 ntBASIC-1.12□□□□□ -2.59
APOEP02649 AC245008.1-201ENST00000608123 476 ntBASIC-1.12□□□□□ -2.59
APOEP02649 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.13□□□□□ -2.59
APOEP02649 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.13□□□□□ -2.59
APOEP02649 RNU6-865P-201ENST00000364772 107 ntBASIC-1.13□□□□□ -2.59
APOEP02649 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.13□□□□□ -2.59
APOEP02649 MIR628-201ENST00000385229 95 ntBASIC-1.13□□□□□ -2.59
APOEP02649 MTND1P1-201ENST00000445453 368 ntBASIC-1.13□□□□□ -2.59
APOEP02649 RNU6-314P-201ENST00000516574 104 ntBASIC-1.13□□□□□ -2.59
APOEP02649 RNU6-264P-201ENST00000517134 104 ntBASIC-1.13□□□□□ -2.59
APOEP02649 SNORD114-15-201ENST00000364687 72 ntBASIC-1.14□□□□□ -2.59
APOEP02649 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.14□□□□□ -2.59
APOEP02649 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.14□□□□□ -2.59
APOEP02649 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.14□□□□□ -2.59
APOEP02649 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
APOEP02649 AC074198.2-201ENST00000508153 258 ntBASIC-1.14□□□□□ -2.59
APOEP02649 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.14□□□□□ -2.59
APOEP02649 AL669831.3-213ENST00000636676 183 ntBASIC-1.14□□□□□ -2.59
APOEP02649 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.15□□□□□ -2.59
APOEP02649 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.15□□□□□ -2.59
APOEP02649 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.15□□□□□ -2.59
APOEP02649 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.15□□□□□ -2.59
APOEP02649 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.15□□□□□ -2.59
APOEP02649 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.15□□□□□ -2.59
APOEP02649 AC096644.2-201ENST00000429278 159 ntBASIC-1.15□□□□□ -2.59
APOEP02649 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.15□□□□□ -2.59
APOEP02649 RNA5SP476-201ENST00000516613 103 ntBASIC-1.15□□□□□ -2.59
APOEP02649 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.15□□□□□ -2.59
APOEP02649 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.15□□□□□ -2.59
APOEP02649 U6.109-201ENST00000636749 87 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 239.2 ms