Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 RNU6-1045P-201ENST00000516321 107 ntBASIC0.89□□□□□ -2.27
CD4P01730 RNU6-1270P-201ENST00000517128 108 ntBASIC0.89□□□□□ -2.27
CD4P01730 AP003484.1-201ENST00000530974 250 ntBASIC0.89□□□□□ -2.27
CD4P01730 MIR4643-201ENST00000577473 78 ntBASIC0.89□□□□□ -2.27
CD4P01730 RNU6-94P-201ENST00000607728 107 ntBASIC0.89□□□□□ -2.27
CD4P01730 AC104465.1-201ENST00000611365 139 ntBASIC0.89□□□□□ -2.27
CD4P01730 AL442067.1-201ENST00000613261 223 ntBASIC0.89□□□□□ -2.27
CD4P01730 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CD4P01730 Y_RNA.54-201ENST00000362766 105 ntBASIC0.88□□□□□ -2.27
CD4P01730 Y_RNA.262-201ENST00000364641 102 ntBASIC0.88□□□□□ -2.27
CD4P01730 Y_RNA.277-201ENST00000364754 102 ntBASIC0.88□□□□□ -2.27
CD4P01730 RNU6-580P-201ENST00000365159 107 ntBASIC0.88□□□□□ -2.27
CD4P01730 Y_RNA.416-201ENST00000384014 113 ntBASIC0.88□□□□□ -2.27
CD4P01730 Y_RNA.494-201ENST00000384432 111 ntBASIC0.88□□□□□ -2.27
CD4P01730 MIR936-201ENST00000401264 98 ntBASIC0.88□□□□□ -2.27
CD4P01730 AL035398.1-201ENST00000430869 322 ntBASIC0.88□□□□□ -2.27
CD4P01730 SNRPGP8-201ENST00000454064 226 ntBASIC0.88□□□□□ -2.27
CD4P01730 SNORA18.4-201ENST00000516440 124 ntBASIC0.88□□□□□ -2.27
CD4P01730 RNU6-453P-201ENST00000516819 85 ntBASIC0.88□□□□□ -2.27
CD4P01730 7SK.10-201ENST00000621414 298 ntBASIC0.88□□□□□ -2.27
CD4P01730 Y_RNA.91-201ENST00000363042 107 ntBASIC0.87□□□□□ -2.27
CD4P01730 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
CD4P01730 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CD4P01730 Y_RNA.410-201ENST00000383992 113 ntBASIC0.87□□□□□ -2.27
CD4P01730 SNORA27-201ENST00000384323 126 ntBASIC0.87□□□□□ -2.27
CD4P01730 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.87□□□□□ -2.27
CD4P01730 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.87□□□□□ -2.27
CD4P01730 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
CD4P01730 AC133485.1-201ENST00000567176 124 ntBASIC0.87□□□□□ -2.27
CD4P01730 AC138907.6-201ENST00000568401 126 ntBASIC0.87□□□□□ -2.27
CD4P01730 AC011921.3-201ENST00000605540 361 ntBASIC0.87□□□□□ -2.27
CD4P01730 HSBP1P2-201ENST00000299671 229 ntBASIC0.86□□□□□ -2.27
CD4P01730 Y_RNA.76-201ENST00000362931 109 ntBASIC0.86□□□□□ -2.27
CD4P01730 SNORD45.3-201ENST00000363836 72 ntBASIC0.86□□□□□ -2.27
CD4P01730 Y_RNA.292-201ENST00000364904 97 ntBASIC0.86□□□□□ -2.27
CD4P01730 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
CD4P01730 MIR568-201ENST00000385036 95 ntBASIC0.86□□□□□ -2.27
CD4P01730 Y_RNA.622-201ENST00000411091 108 ntBASIC0.86□□□□□ -2.27
CD4P01730 RPS29P24-201ENST00000486345 171 ntBASIC0.86□□□□□ -2.27
CD4P01730 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.86□□□□□ -2.27
CD4P01730 Y_RNA.668-201ENST00000516233 93 ntBASIC0.86□□□□□ -2.27
CD4P01730 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.86□□□□□ -2.27
CD4P01730 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
CD4P01730 RNU6-103P-201ENST00000363686 107 ntBASIC0.85□□□□□ -2.27
CD4P01730 Y_RNA.199-201ENST00000364014 102 ntBASIC0.85□□□□□ -2.27
CD4P01730 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
CD4P01730 SNORD36C-201ENST00000516733 66 ntBASIC0.85□□□□□ -2.27
CD4P01730 MIR1273G-201ENST00000577677 100 ntBASIC0.85□□□□□ -2.27
CD4P01730 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
CD4P01730 SNORD38B-201ENST00000384690 67 ntBASIC0.84□□□□□ -2.27
CD4P01730 RNA5SP95-201ENST00000410319 137 ntBASIC0.84□□□□□ -2.27
CD4P01730 AF228730.3-201ENST00000436691 102 ntBASIC0.84□□□□□ -2.27
CD4P01730 RNU7-96P-201ENST00000459535 64 ntBASIC0.84□□□□□ -2.27
CD4P01730 RNU6-958P-201ENST00000516995 106 ntBASIC0.84□□□□□ -2.27
CD4P01730 SNORD38B-202ENST00000625943 69 ntBASIC0.84□□□□□ -2.27
CD4P01730 RNU6-728P-201ENST00000365375 104 ntBASIC0.83□□□□□ -2.28
CD4P01730 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
CD4P01730 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
CD4P01730 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
CD4P01730 SNORD105-201ENST00000386910 85 ntBASIC0.83□□□□□ -2.28
CD4P01730 SNORD58.1-201ENST00000391313 66 ntBASIC0.83□□□□□ -2.28
CD4P01730 SNORA79-201ENST00000408376 140 ntBASIC0.83□□□□□ -2.28
CD4P01730 SNORD99-201ENST00000408612 74 ntBASIC0.83□□□□□ -2.28
CD4P01730 RNA5SP193-201ENST00000410353 107 ntBASIC0.83□□□□□ -2.28
CD4P01730 AC006461.1-201ENST00000412637 326 ntBASIC0.83□□□□□ -2.28
CD4P01730 AL590095.2-201ENST00000604136 117 ntBASIC0.83□□□□□ -2.28
CD4P01730 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
CD4P01730 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CD4P01730 Y_RNA.30-201ENST00000362572 97 ntBASIC0.82□□□□□ -2.28
CD4P01730 RNY4P28-201ENST00000365281 93 ntBASIC0.82□□□□□ -2.28
CD4P01730 RNU6-1189P-201ENST00000383958 107 ntBASIC0.82□□□□□ -2.28
CD4P01730 Y_RNA.478-201ENST00000384358 107 ntBASIC0.82□□□□□ -2.28
CD4P01730 RNU6-125P-201ENST00000384505 107 ntBASIC0.82□□□□□ -2.28
CD4P01730 RNU4-43P-201ENST00000410628 137 ntBASIC0.82□□□□□ -2.28
CD4P01730 Y_RNA.20-201ENST00000362479 113 ntBASIC0.81□□□□□ -2.28
CD4P01730 RNA5SP457-201ENST00000363657 124 ntBASIC0.81□□□□□ -2.28
CD4P01730 SNORD27-201ENST00000363981 72 ntBASIC0.81□□□□□ -2.28
CD4P01730 Y_RNA.350-201ENST00000365409 98 ntBASIC0.81□□□□□ -2.28
CD4P01730 RNU6-913P-201ENST00000390913 95 ntBASIC0.81□□□□□ -2.28
CD4P01730 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.81□□□□□ -2.28
CD4P01730 AC090844.1-201ENST00000422019 156 ntBASIC0.81□□□□□ -2.28
CD4P01730 AL118496.2-201ENST00000448300 230 ntBASIC0.81□□□□□ -2.28
CD4P01730 Z97988.1-201ENST00000637697 135 ntBASIC0.81□□□□□ -2.28
CD4P01730 Y_RNA.23-201ENST00000362496 106 ntBASIC0.8□□□□□ -2.28
CD4P01730 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
CD4P01730 Y_RNA.440-201ENST00000384120 114 ntBASIC0.8□□□□□ -2.28
CD4P01730 Y_RNA.542-201ENST00000384641 111 ntBASIC0.8□□□□□ -2.28
CD4P01730 RPS26P5-201ENST00000418544 335 ntBASIC0.8□□□□□ -2.28
CD4P01730 MTND3P2-201ENST00000438452 342 ntBASIC0.8□□□□□ -2.28
CD4P01730 COX6CP6-201ENST00000490840 228 ntBASIC0.8□□□□□ -2.28
CD4P01730 RNU6-998P-201ENST00000515894 101 ntBASIC0.8□□□□□ -2.28
CD4P01730 RNU6-561P-201ENST00000516222 102 ntBASIC0.8□□□□□ -2.28
CD4P01730 MIR4711-201ENST00000578274 70 ntBASIC0.8□□□□□ -2.28
CD4P01730 MIR4744-201ENST00000581563 82 ntBASIC0.8□□□□□ -2.28
CD4P01730 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
CD4P01730 AC062037.2-201ENST00000610137 73 ntBASIC0.8□□□□□ -2.28
CD4P01730 MIR8055-201ENST00000610739 97 ntBASIC0.8□□□□□ -2.28
CD4P01730 U4.1-201ENST00000620349 87 ntBASIC0.8□□□□□ -2.28
CD4P01730 AC010487.4-201ENST00000637027 61 ntBASIC0.8□□□□□ -2.28
CD4P01730 SNORA1.1-201ENST00000364671 133 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 713.7 ms