Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
PGK1P00558 Y_RNA.634-201ENST00000364811 113 ntBASIC0.63□□□□□ -2.31
PGK1P00558 RNU6-396P-201ENST00000365369 105 ntBASIC0.63□□□□□ -2.31
PGK1P00558 RNU6-716P-201ENST00000365621 103 ntBASIC0.63□□□□□ -2.31
PGK1P00558 RNU6-205P-201ENST00000390858 107 ntBASIC0.63□□□□□ -2.31
PGK1P00558 SNORD89-201ENST00000390981 114 ntBASIC0.63□□□□□ -2.31
PGK1P00558 MIR1302-6-201ENST00000408466 90 ntBASIC0.63□□□□□ -2.31
PGK1P00558 Y_RNA.590-201ENST00000410140 107 ntBASIC0.63□□□□□ -2.31
PGK1P00558 AC087499.4-201ENST00000448505 178 ntBASIC0.63□□□□□ -2.31
PGK1P00558 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.63□□□□□ -2.31
PGK1P00558 snoU13.16-201ENST00000459350 104 ntBASIC0.63□□□□□ -2.31
PGK1P00558 AP003484.1-201ENST00000530974 250 ntBASIC0.63□□□□□ -2.31
PGK1P00558 AC008737.2-201ENST00000599446 118 ntBASIC0.63□□□□□ -2.31
PGK1P00558 AL360085.1-201ENST00000604713 532 ntBASIC0.63□□□□□ -2.31
PGK1P00558 AC134878.1-201ENST00000619901 243 ntBASIC0.63□□□□□ -2.31
PGK1P00558 AL365265.1-201ENST00000621045 234 ntBASIC0.63□□□□□ -2.31
PGK1P00558 MIR330-201ENST00000362196 94 ntBASIC0.62□□□□□ -2.31
PGK1P00558 Y_RNA.76-201ENST00000362931 109 ntBASIC0.62□□□□□ -2.31
PGK1P00558 RNU6-1309P-201ENST00000363305 108 ntBASIC0.62□□□□□ -2.31
PGK1P00558 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
PGK1P00558 RNU6-1067P-201ENST00000384752 107 ntBASIC0.62□□□□□ -2.31
PGK1P00558 MIR616-201ENST00000385293 97 ntBASIC0.62□□□□□ -2.31
PGK1P00558 MIR1197-201ENST00000408818 88 ntBASIC0.62□□□□□ -2.31
PGK1P00558 RNU6-994P-201ENST00000410507 111 ntBASIC0.62□□□□□ -2.31
PGK1P00558 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
PGK1P00558 Y_RNA.622-201ENST00000411091 108 ntBASIC0.62□□□□□ -2.31
PGK1P00558 AC244023.1-201ENST00000426884 112 ntBASIC0.62□□□□□ -2.31
PGK1P00558 HMGN1P33-201ENST00000432945 451 ntBASIC0.62□□□□□ -2.31
PGK1P00558 AF228730.3-201ENST00000436691 102 ntBASIC0.62□□□□□ -2.31
PGK1P00558 RNU7-73P-201ENST00000458743 63 ntBASIC0.62□□□□□ -2.31
PGK1P00558 U7.7-201ENST00000459276 60 ntBASIC0.62□□□□□ -2.31
PGK1P00558 RNU6-1110P-201ENST00000516462 101 ntBASIC0.62□□□□□ -2.31
PGK1P00558 RNU6-365P-201ENST00000517113 106 ntBASIC0.62□□□□□ -2.31
PGK1P00558 AC242498.1-201ENST00000604134 111 ntBASIC0.62□□□□□ -2.31
PGK1P00558 7SK.10-201ENST00000621414 298 ntBASIC0.62□□□□□ -2.31
PGK1P00558 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
PGK1P00558 Y_RNA.23-201ENST00000362496 106 ntBASIC0.61□□□□□ -2.31
PGK1P00558 Y_RNA.47-201ENST00000362697 108 ntBASIC0.61□□□□□ -2.31
PGK1P00558 Y_RNA.352-201ENST00000365439 102 ntBASIC0.61□□□□□ -2.31
PGK1P00558 Y_RNA.432-201ENST00000384087 111 ntBASIC0.61□□□□□ -2.31
PGK1P00558 RNY3P5-201ENST00000384127 102 ntBASIC0.61□□□□□ -2.31
PGK1P00558 SNORA27-201ENST00000384323 126 ntBASIC0.61□□□□□ -2.31
PGK1P00558 RNU6-1228P-201ENST00000391014 107 ntBASIC0.61□□□□□ -2.31
PGK1P00558 SNORA40.5-201ENST00000391061 128 ntBASIC0.61□□□□□ -2.31
PGK1P00558 AL606845.1-201ENST00000404881 255 ntBASIC0.61□□□□□ -2.31
PGK1P00558 SNORD99-201ENST00000408612 74 ntBASIC0.61□□□□□ -2.31
PGK1P00558 RNU6-1190P-201ENST00000410811 104 ntBASIC0.61□□□□□ -2.31
PGK1P00558 RNU2-55P-201ENST00000411146 174 ntBASIC0.61□□□□□ -2.31
PGK1P00558 SNRPGP8-201ENST00000454064 226 ntBASIC0.61□□□□□ -2.31
PGK1P00558 RPS29P24-201ENST00000486345 171 ntBASIC0.61□□□□□ -2.31
PGK1P00558 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
PGK1P00558 RNU6-561P-201ENST00000516222 102 ntBASIC0.61□□□□□ -2.31
PGK1P00558 RNU6-1299P-201ENST00000516316 100 ntBASIC0.61□□□□□ -2.31
PGK1P00558 RNU6-126P-201ENST00000516685 103 ntBASIC0.61□□□□□ -2.31
PGK1P00558 MIR4264-201ENST00000583520 66 ntBASIC0.61□□□□□ -2.31
PGK1P00558 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
PGK1P00558 Y_RNA.251-201ENST00000364551 99 ntBASIC0.6□□□□□ -2.31
PGK1P00558 RNU4-17P-201ENST00000365598 141 ntBASIC0.6□□□□□ -2.31
PGK1P00558 Y_RNA.416-201ENST00000384014 113 ntBASIC0.6□□□□□ -2.31
PGK1P00558 SNORA1-201ENST00000384107 130 ntBASIC0.6□□□□□ -2.31
PGK1P00558 RNU6-1011P-201ENST00000384668 107 ntBASIC0.6□□□□□ -2.31
PGK1P00558 Y_RNA.562-201ENST00000384695 113 ntBASIC0.6□□□□□ -2.31
PGK1P00558 AC015818.7-201ENST00000428754 109 ntBASIC0.6□□□□□ -2.31
PGK1P00558 AC087499.7-201ENST00000441958 109 ntBASIC0.6□□□□□ -2.31
PGK1P00558 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
PGK1P00558 RNA5SP153-201ENST00000516498 76 ntBASIC0.6□□□□□ -2.31
PGK1P00558 RNU6-504P-201ENST00000516568 104 ntBASIC0.6□□□□□ -2.31
PGK1P00558 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
PGK1P00558 Z97988.1-201ENST00000637697 135 ntBASIC0.6□□□□□ -2.31
PGK1P00558 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
PGK1P00558 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
PGK1P00558 Y_RNA.133-201ENST00000363428 110 ntBASIC0.59□□□□□ -2.31
PGK1P00558 Y_RNA.176-201ENST00000363815 109 ntBASIC0.59□□□□□ -2.31
PGK1P00558 Y_RNA.277-201ENST00000364754 102 ntBASIC0.59□□□□□ -2.31
PGK1P00558 MIR568-201ENST00000385036 95 ntBASIC0.59□□□□□ -2.31
PGK1P00558 RNU2-70P-201ENST00000410718 179 ntBASIC0.59□□□□□ -2.31
PGK1P00558 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
PGK1P00558 RNU7-67P-201ENST00000459003 62 ntBASIC0.59□□□□□ -2.31
PGK1P00558 RNU6-998P-201ENST00000515894 101 ntBASIC0.59□□□□□ -2.31
PGK1P00558 Y_RNA.679-201ENST00000516416 91 ntBASIC0.59□□□□□ -2.31
PGK1P00558 RNU6-958P-201ENST00000516995 106 ntBASIC0.59□□□□□ -2.31
PGK1P00558 AC025627.3-201ENST00000582078 182 ntBASIC0.59□□□□□ -2.31
PGK1P00558 MIR8055-201ENST00000610739 97 ntBASIC0.59□□□□□ -2.31
PGK1P00558 AL442067.1-201ENST00000613261 223 ntBASIC0.59□□□□□ -2.31
PGK1P00558 MIR6740-201ENST00000618268 113 ntBASIC0.59□□□□□ -2.31
PGK1P00558 Y_RNA.149-201ENST00000363558 117 ntBASIC0.58□□□□□ -2.32
PGK1P00558 Y_RNA.440-201ENST00000384120 114 ntBASIC0.58□□□□□ -2.32
PGK1P00558 Y_RNA.459-201ENST00000384251 102 ntBASIC0.58□□□□□ -2.32
PGK1P00558 SNORD77.3-201ENST00000391113 65 ntBASIC0.58□□□□□ -2.32
PGK1P00558 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.58□□□□□ -2.32
PGK1P00558 SNORD83.1-201ENST00000411362 77 ntBASIC0.58□□□□□ -2.32
PGK1P00558 MTCYBP9-201ENST00000431021 303 ntBASIC0.58□□□□□ -2.32
PGK1P00558 AL138752.1-201ENST00000452964 351 ntBASIC0.58□□□□□ -2.32
PGK1P00558 AC067940.1-201ENST00000458411 300 ntBASIC0.58□□□□□ -2.32
PGK1P00558 SNORD127-201ENST00000458892 86 ntBASIC0.58□□□□□ -2.32
PGK1P00558 AC107297.1-201ENST00000459991 176 ntBASIC0.58□□□□□ -2.32
PGK1P00558 MTND1P19-201ENST00000511780 315 ntBASIC0.58□□□□□ -2.32
PGK1P00558 Y_RNA.668-201ENST00000516233 93 ntBASIC0.58□□□□□ -2.32
PGK1P00558 AP000753.3-201ENST00000604083 169 ntBASIC0.58□□□□□ -2.32
PGK1P00558 Y_RNA.85-201ENST00000363014 111 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms