Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNU6-1336P-201ENST00000383886 109 ntBASIC2.02□□□□□ -2.09
RAPGEF3O95398 HSPE1P24-201ENST00000450782 238 ntBASIC2.02□□□□□ -2.09
RAPGEF3O95398 RPS29P29-201ENST00000456396 171 ntBASIC2.02□□□□□ -2.09
RAPGEF3O95398 SNORA25.12-201ENST00000516202 82 ntBASIC2.02□□□□□ -2.09
RAPGEF3O95398 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RAPGEF3O95398 Y_RNA.30-201ENST00000362572 97 ntBASIC2.01□□□□□ -2.09
RAPGEF3O95398 Y_RNA.568-201ENST00000384742 113 ntBASIC2.01□□□□□ -2.09
RAPGEF3O95398 RNU6-1067P-201ENST00000384752 107 ntBASIC2.01□□□□□ -2.09
RAPGEF3O95398 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.01□□□□□ -2.09
RAPGEF3O95398 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.01□□□□□ -2.09
RAPGEF3O95398 RNU7-43P-201ENST00000516554 64 ntBASIC2.01□□□□□ -2.09
RAPGEF3O95398 SNORD36C-201ENST00000516733 66 ntBASIC2.01□□□□□ -2.09
RAPGEF3O95398 SNORA18.7-201ENST00000516910 131 ntBASIC2.01□□□□□ -2.09
RAPGEF3O95398 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.01□□□□□ -2.09
RAPGEF3O95398 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.01□□□□□ -2.09
RAPGEF3O95398 MIR8063-201ENST00000621930 81 ntBASIC2.01□□□□□ -2.09
RAPGEF3O95398 Y_RNA.120-201ENST00000363304 110 ntBASIC2□□□□□ -2.09
RAPGEF3O95398 Y_RNA.241-201ENST00000364470 117 ntBASIC2□□□□□ -2.09
RAPGEF3O95398 SNORD18B-201ENST00000365659 72 ntBASIC2□□□□□ -2.09
RAPGEF3O95398 Y_RNA.440-201ENST00000384120 114 ntBASIC2□□□□□ -2.09
RAPGEF3O95398 AC005908.1-201ENST00000468701 347 ntBASIC2□□□□□ -2.09
RAPGEF3O95398 RNU7-181P-201ENST00000517234 74 ntBASIC2□□□□□ -2.09
RAPGEF3O95398 AP001340.1-201ENST00000624405 217 ntBASIC2□□□□□ -2.09
RAPGEF3O95398 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.99□□□□□ -2.09
RAPGEF3O95398 Y_RNA.52-201ENST00000362760 96 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 RNU6-704P-201ENST00000364162 103 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 SNORD1A-201ENST00000364968 72 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 Y_RNA.370-201ENST00000365589 108 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 MIR222-201ENST00000384992 110 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 MTATP6P21-201ENST00000440681 189 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 AC079140.2-201ENST00000506193 142 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 AL357312.1-201ENST00000603879 298 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 AP001485.1-201ENST00000604799 199 ntBASIC1.99□□□□□ -2.09
RAPGEF3O95398 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
RAPGEF3O95398 RNU6-187P-201ENST00000384139 106 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 SNORA70.7-201ENST00000384159 133 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 SNORA27-201ENST00000384323 126 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 RNU6-1065P-201ENST00000384513 106 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 SNX2P2-201ENST00000424553 323 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 RNU7-80P-201ENST00000459562 61 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 RPS26P48-201ENST00000491713 339 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 RNU6-426P-201ENST00000516464 97 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 MIR4422-201ENST00000581938 83 ntBASIC1.98□□□□□ -2.09
RAPGEF3O95398 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RAPGEF3O95398 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.98□□□□□ -2.09
RAPGEF3O95398 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.98□□□□□ -2.09
RAPGEF3O95398 AC010332.2-201ENST00000613083 1904 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 Y_RNA.178-201ENST00000363832 102 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 Y_RNA.537-201ENST00000384626 109 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 MIR320A-201ENST00000385302 82 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 RNU1-78P-201ENST00000391248 165 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 RNU2-13P-201ENST00000515909 113 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 RNU6-1149P-201ENST00000516810 97 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 SCARNA15-202ENST00000516881 127 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 AC090821.2-201ENST00000523552 176 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 MIR548AR-201ENST00000582191 57 ntBASIC1.97□□□□□ -2.09
RAPGEF3O95398 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
RAPGEF3O95398 Y_RNA.420-201ENST00000384043 110 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 Y_RNA.454-201ENST00000384224 113 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 AL603914.1-201ENST00000401964 204 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 TMSB4XP3-201ENST00000445144 114 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 RNU7-96P-201ENST00000459535 64 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 AP001328.1-201ENST00000528550 176 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 GHRLOS.1-201ENST00000610995 70 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 MIR376A2-201ENST00000636782 80 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 MTND5P32-201ENST00000560711 1802 ntBASIC1.96□□□□□ -2.1
RAPGEF3O95398 MIR520C-201ENST00000385005 87 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 SNORD41-201ENST00000386967 70 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 SNORA40-201ENST00000388090 126 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 AC027119.1-201ENST00000440877 241 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 RPS29P24-201ENST00000486345 171 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 RNU6-922P-201ENST00000516753 99 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 RNU7-70P-201ENST00000516941 66 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 MIR3122-201ENST00000577243 73 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 MIR4764-201ENST00000580680 88 ntBASIC1.95□□□□□ -2.1
RAPGEF3O95398 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.95□□□□□ -2.1
RAPGEF3O95398 RNY1P11-201ENST00000363759 113 ntBASIC1.94□□□□□ -2.1
RAPGEF3O95398 Y_RNA.351-201ENST00000365436 96 ntBASIC1.94□□□□□ -2.1
RAPGEF3O95398 SNORD28B-201ENST00000390993 75 ntBASIC1.94□□□□□ -2.1
RAPGEF3O95398 RNU6-460P-201ENST00000391158 108 ntBASIC1.94□□□□□ -2.1
RAPGEF3O95398 RPL30P7-201ENST00000479312 323 ntBASIC1.94□□□□□ -2.1
RAPGEF3O95398 AC019176.1-201ENST00000518519 225 ntBASIC1.94□□□□□ -2.1
RAPGEF3O95398 TUG1_4.1-201ENST00000619464 181 ntBASIC1.94□□□□□ -2.1
RAPGEF3O95398 SNORA24-201ENST00000384096 131 ntBASIC1.93□□□□□ -2.1
RAPGEF3O95398 AC023790.1-201ENST00000482174 347 ntBASIC1.93□□□□□ -2.1
RAPGEF3O95398 RNA5SP236-201ENST00000516169 116 ntBASIC1.93□□□□□ -2.1
RAPGEF3O95398 MIR3937-201ENST00000580135 106 ntBASIC1.93□□□□□ -2.1
RAPGEF3O95398 RN7SL793P-201ENST00000583259 296 ntBASIC1.93□□□□□ -2.1
RAPGEF3O95398 U7.2-201ENST00000607576 63 ntBASIC1.93□□□□□ -2.1
RAPGEF3O95398 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.93□□□□□ -2.1
RAPGEF3O95398 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
RAPGEF3O95398 RNU6-915P-201ENST00000364943 103 ntBASIC1.92□□□□□ -2.1
RAPGEF3O95398 RNA5SP363-201ENST00000365072 115 ntBASIC1.92□□□□□ -2.1
RAPGEF3O95398 RNU4-61P-201ENST00000411243 107 ntBASIC1.92□□□□□ -2.1
RAPGEF3O95398 RNU6-998P-201ENST00000515894 101 ntBASIC1.92□□□□□ -2.1
RAPGEF3O95398 Y_RNA.692-201ENST00000516627 105 ntBASIC1.92□□□□□ -2.1
RAPGEF3O95398 RNU7-53P-201ENST00000516705 60 ntBASIC1.92□□□□□ -2.1
RAPGEF3O95398 RNU6-789P-201ENST00000517105 102 ntBASIC1.92□□□□□ -2.1
RAPGEF3O95398 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms