Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 Y_RNA.47-201ENST00000362697 108 ntBASIC0.77□□□□□ -2.29
MBD4O95243 Y_RNA.91-201ENST00000363042 107 ntBASIC0.77□□□□□ -2.29
MBD4O95243 RNU6-1189P-201ENST00000383958 107 ntBASIC0.77□□□□□ -2.29
MBD4O95243 MT-TT-201ENST00000387460 66 ntBASIC0.77□□□□□ -2.29
MBD4O95243 RNU6-913P-201ENST00000390913 95 ntBASIC0.77□□□□□ -2.29
MBD4O95243 Y_RNA.622-201ENST00000411091 108 ntBASIC0.77□□□□□ -2.29
MBD4O95243 AC244098.3-201ENST00000424803 96 ntBASIC0.77□□□□□ -2.29
MBD4O95243 MTND5P15-201ENST00000434246 349 ntBASIC0.77□□□□□ -2.29
MBD4O95243 AF228730.3-201ENST00000436691 102 ntBASIC0.77□□□□□ -2.29
MBD4O95243 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.77□□□□□ -2.29
MBD4O95243 AL360085.1-201ENST00000604713 532 ntBASIC0.77□□□□□ -2.29
MBD4O95243 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.77□□□□□ -2.29
MBD4O95243 Y_RNA.199-201ENST00000364014 102 ntBASIC0.76□□□□□ -2.29
MBD4O95243 snoU2_19.4-201ENST00000364329 80 ntBASIC0.76□□□□□ -2.29
MBD4O95243 SNORA1.1-201ENST00000364671 133 ntBASIC0.76□□□□□ -2.29
MBD4O95243 RNU1-133P-201ENST00000364867 167 ntBASIC0.76□□□□□ -2.29
MBD4O95243 MIR489-201ENST00000384923 84 ntBASIC0.76□□□□□ -2.29
MBD4O95243 SNORD77.3-201ENST00000391113 65 ntBASIC0.76□□□□□ -2.29
MBD4O95243 AL358176.2-201ENST00000425769 204 ntBASIC0.76□□□□□ -2.29
MBD4O95243 AC244023.1-201ENST00000426884 112 ntBASIC0.76□□□□□ -2.29
MBD4O95243 SNRPGP8-201ENST00000454064 226 ntBASIC0.76□□□□□ -2.29
MBD4O95243 RNU6-998P-201ENST00000515894 101 ntBASIC0.76□□□□□ -2.29
MBD4O95243 RNU6-977P-201ENST00000516411 103 ntBASIC0.76□□□□□ -2.29
MBD4O95243 RNU6-453P-201ENST00000516819 85 ntBASIC0.76□□□□□ -2.29
MBD4O95243 MIR4643-201ENST00000577473 78 ntBASIC0.76□□□□□ -2.29
MBD4O95243 AC242498.1-201ENST00000604134 111 ntBASIC0.76□□□□□ -2.29
MBD4O95243 AL365265.1-201ENST00000621045 234 ntBASIC0.76□□□□□ -2.29
MBD4O95243 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
MBD4O95243 RNU6-369P-201ENST00000362515 102 ntBASIC0.75□□□□□ -2.29
MBD4O95243 RNU6-1309P-201ENST00000363305 108 ntBASIC0.75□□□□□ -2.29
MBD4O95243 RNU4-17P-201ENST00000365598 141 ntBASIC0.75□□□□□ -2.29
MBD4O95243 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.75□□□□□ -2.29
MBD4O95243 MIR548I3-201ENST00000408378 149 ntBASIC0.75□□□□□ -2.29
MBD4O95243 SNORD83.1-201ENST00000411362 77 ntBASIC0.75□□□□□ -2.29
MBD4O95243 snoU13.21-201ENST00000459368 105 ntBASIC0.75□□□□□ -2.29
MBD4O95243 MIR4771-2-201ENST00000577758 74 ntBASIC0.75□□□□□ -2.29
MBD4O95243 MIR4771-1-201ENST00000582617 74 ntBASIC0.75□□□□□ -2.29
MBD4O95243 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
MBD4O95243 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
MBD4O95243 Y_RNA.277-201ENST00000364754 102 ntBASIC0.74□□□□□ -2.29
MBD4O95243 Y_RNA.352-201ENST00000365439 102 ntBASIC0.74□□□□□ -2.29
MBD4O95243 SNORA79-201ENST00000408376 140 ntBASIC0.74□□□□□ -2.29
MBD4O95243 RNU2-38P-201ENST00000410856 79 ntBASIC0.74□□□□□ -2.29
MBD4O95243 RNU6-1132P-201ENST00000459214 107 ntBASIC0.74□□□□□ -2.29
MBD4O95243 Y_RNA.76-201ENST00000362931 109 ntBASIC0.73□□□□□ -2.29
MBD4O95243 Y_RNA.149-201ENST00000363558 117 ntBASIC0.73□□□□□ -2.29
MBD4O95243 Y_RNA.416-201ENST00000384014 113 ntBASIC0.73□□□□□ -2.29
MBD4O95243 Y_RNA.440-201ENST00000384120 114 ntBASIC0.73□□□□□ -2.29
MBD4O95243 MIR520F-201ENST00000384824 87 ntBASIC0.73□□□□□ -2.29
MBD4O95243 RNU6-381P-201ENST00000391259 108 ntBASIC0.73□□□□□ -2.29
MBD4O95243 MTND2P23-201ENST00000422990 651 ntBASIC0.73□□□□□ -2.29
MBD4O95243 MIR18B-201ENST00000454574 71 ntBASIC0.73□□□□□ -2.29
MBD4O95243 RNU2-11P-201ENST00000459191 187 ntBASIC0.73□□□□□ -2.29
MBD4O95243 RNU6-327P-201ENST00000516270 127 ntBASIC0.73□□□□□ -2.29
MBD4O95243 SCARNA15.1-201ENST00000516384 125 ntBASIC0.73□□□□□ -2.29
MBD4O95243 MIR7111-201ENST00000619751 72 ntBASIC0.73□□□□□ -2.29
MBD4O95243 MIR6515-201ENST00000619843 57 ntBASIC0.73□□□□□ -2.29
MBD4O95243 Y_RNA.54-201ENST00000362766 105 ntBASIC0.72□□□□□ -2.29
MBD4O95243 Y_RNA.133-201ENST00000363428 110 ntBASIC0.72□□□□□ -2.29
MBD4O95243 RNU6-103P-201ENST00000363686 107 ntBASIC0.72□□□□□ -2.29
MBD4O95243 Y_RNA.262-201ENST00000364641 102 ntBASIC0.72□□□□□ -2.29
MBD4O95243 Y_RNA.542-201ENST00000384641 111 ntBASIC0.72□□□□□ -2.29
MBD4O95243 MIR573-201ENST00000384964 99 ntBASIC0.72□□□□□ -2.29
MBD4O95243 MIR568-201ENST00000385036 95 ntBASIC0.72□□□□□ -2.29
MBD4O95243 HMGN1P33-201ENST00000432945 451 ntBASIC0.72□□□□□ -2.29
MBD4O95243 SNORD127-201ENST00000458892 86 ntBASIC0.72□□□□□ -2.29
MBD4O95243 AC011921.3-201ENST00000605540 361 ntBASIC0.72□□□□□ -2.29
MBD4O95243 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
MBD4O95243 Y_RNA.7-201ENST00000362352 102 ntBASIC0.71□□□□□ -2.3
MBD4O95243 RNU6-653P-201ENST00000363074 106 ntBASIC0.71□□□□□ -2.3
MBD4O95243 RNA5SP499-201ENST00000363982 119 ntBASIC0.71□□□□□ -2.3
MBD4O95243 RNU6-728P-201ENST00000365375 104 ntBASIC0.71□□□□□ -2.3
MBD4O95243 RNU6-733P-201ENST00000410759 104 ntBASIC0.71□□□□□ -2.3
MBD4O95243 RNA5SP222-201ENST00000411039 105 ntBASIC0.71□□□□□ -2.3
MBD4O95243 RNU6-602P-201ENST00000411155 105 ntBASIC0.71□□□□□ -2.3
MBD4O95243 AL138752.1-201ENST00000452964 351 ntBASIC0.71□□□□□ -2.3
MBD4O95243 RNU6-561P-201ENST00000516222 102 ntBASIC0.71□□□□□ -2.3
MBD4O95243 MIR302B-201ENST00000362188 73 ntBASIC0.7□□□□□ -2.3
MBD4O95243 RNY1-201ENST00000364228 113 ntBASIC0.7□□□□□ -2.3
MBD4O95243 MIR520H-201ENST00000385126 88 ntBASIC0.7□□□□□ -2.3
MBD4O95243 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
MBD4O95243 RNU6-1165P-201ENST00000410119 107 ntBASIC0.7□□□□□ -2.3
MBD4O95243 RNA5SP261-201ENST00000410536 106 ntBASIC0.7□□□□□ -2.3
MBD4O95243 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.7□□□□□ -2.3
MBD4O95243 RNA5SP121-201ENST00000516537 101 ntBASIC0.7□□□□□ -2.3
MBD4O95243 AC018659.1-201ENST00000551083 169 ntBASIC0.7□□□□□ -2.3
MBD4O95243 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.7□□□□□ -2.3
MBD4O95243 MIR4804-201ENST00000581683 73 ntBASIC0.7□□□□□ -2.3
MBD4O95243 MIR4676-201ENST00000583078 72 ntBASIC0.7□□□□□ -2.3
MBD4O95243 AL442067.1-201ENST00000613261 223 ntBASIC0.7□□□□□ -2.3
MBD4O95243 MIR6740-201ENST00000618268 113 ntBASIC0.7□□□□□ -2.3
MBD4O95243 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
MBD4O95243 Y_RNA.162-201ENST00000363683 102 ntBASIC0.69□□□□□ -2.3
MBD4O95243 Y_RNA.288-201ENST00000364854 92 ntBASIC0.69□□□□□ -2.3
MBD4O95243 Y_RNA.292-201ENST00000364904 97 ntBASIC0.69□□□□□ -2.3
MBD4O95243 RNU4-45P-201ENST00000365469 141 ntBASIC0.69□□□□□ -2.3
MBD4O95243 MIR588-201ENST00000384900 83 ntBASIC0.69□□□□□ -2.3
MBD4O95243 MIR548H3-201ENST00000408771 118 ntBASIC0.69□□□□□ -2.3
MBD4O95243 MTCYBP9-201ENST00000431021 303 ntBASIC0.69□□□□□ -2.3
MBD4O95243 snoU13.2-201ENST00000459201 104 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms