Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 RNU6-1054P-201ENST00000411293 104 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
KDM4BO94953 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.22□□□□□ -2.21
KDM4BO94953 Y_RNA.651-201ENST00000459380 103 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 RNA5SP272-201ENST00000516095 111 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 RNU6-947P-201ENST00000516264 106 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 RN7SKP88-201ENST00000516847 250 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 AP001328.1-201ENST00000528550 176 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 CYP3A52P-201ENST00000563326 91 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.22□□□□□ -2.21
KDM4BO94953 7SK.8-201ENST00000612110 250 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 7SK.11-201ENST00000615477 250 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 7SK.13-201ENST00000622040 250 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.22□□□□□ -2.21
KDM4BO94953 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
KDM4BO94953 RNU6-704P-201ENST00000364162 103 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 SNORD18B-201ENST00000365659 72 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 RNU6-913P-201ENST00000390913 95 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 RNU6-257P-201ENST00000410238 98 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 SNORD13-201ENST00000459299 104 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 Y_RNA.690-201ENST00000516603 95 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 MIR548AO-201ENST00000579992 96 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 MIR8065-201ENST00000620577 100 ntBASIC1.21□□□□□ -2.22
KDM4BO94953 MIR342-201ENST00000362212 99 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 Y_RNA.586-201ENST00000391146 98 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 MIR1302-7-201ENST00000408841 72 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 MTND4LP9-201ENST00000427694 174 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.2□□□□□ -2.22
KDM4BO94953 RNU7-70P-201ENST00000516941 66 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 AL020996.3-201ENST00000606617 222 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 U7.2-201ENST00000607576 63 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 MIR8055-201ENST00000610739 97 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 AC011603.4-201ENST00000611325 277 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 MIR7843-201ENST00000622274 79 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 AL596211.1-201ENST00000569873 2277 ntBASIC1.2□□□□□ -2.22
KDM4BO94953 MIR302B-201ENST00000362188 73 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 RNU6-349P-201ENST00000362402 107 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 RNU6-508P-201ENST00000363231 103 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 RNU6-309P-201ENST00000364573 106 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 RNY1P6-201ENST00000384193 109 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 SNORA40-201ENST00000388090 126 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 SNORA26.6-201ENST00000391256 115 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.19□□□□□ -2.22
KDM4BO94953 AC245047.7-201ENST00000440265 293 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 RNU6-113P-201ENST00000516653 101 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 MIR3121-201ENST00000579680 77 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 MIR3124-201ENST00000582636 67 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 AP000942.3-201ENST00000603702 160 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
KDM4BO94953 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
KDM4BO94953 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.19□□□□□ -2.22
KDM4BO94953 RNA5SP264-201ENST00000363115 107 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 Y_RNA.280-201ENST00000364765 112 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 MIR1185-1-201ENST00000408598 86 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.18□□□□□ -2.22
KDM4BO94953 AC048334.1-201ENST00000477975 159 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 Y_RNA.692-201ENST00000516627 105 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 DNAJC19P9-201ENST00000555084 351 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 AL645939.4-201ENST00000604495 135 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 PRELID3BP2-201ENST00000605362 201 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 Z97988.1-201ENST00000637697 135 ntBASIC1.18□□□□□ -2.22
KDM4BO94953 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KDM4BO94953 SNORA25.3-201ENST00000363205 127 ntBASIC1.17□□□□□ -2.22
KDM4BO94953 RNU6-1190P-201ENST00000410811 104 ntBASIC1.17□□□□□ -2.22
KDM4BO94953 AC108210.2-201ENST00000503681 201 ntBASIC1.17□□□□□ -2.22
KDM4BO94953 SNORA31.2-201ENST00000516019 134 ntBASIC1.17□□□□□ -2.22
KDM4BO94953 TUG1_4.1-201ENST00000619464 181 ntBASIC1.17□□□□□ -2.22
KDM4BO94953 AC021613.1-201ENST00000623880 111 ntBASIC1.17□□□□□ -2.22
KDM4BO94953 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.17□□□□□ -2.22
KDM4BO94953 Y_RNA.430-201ENST00000384081 110 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 RNU6-1319P-201ENST00000390855 104 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 RNU6-747P-201ENST00000390928 104 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 RNU6-241P-201ENST00000391148 104 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 RNA5SP261-201ENST00000410536 106 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 RNU6-177P-201ENST00000411257 104 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 RNU7-45P-201ENST00000459460 63 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 RNU11-2P-201ENST00000516898 142 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 Y_RNA.757-201ENST00000578934 114 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 MIR4524B-201ENST00000581569 115 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 HSPE1P19-201ENST00000603327 295 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 MIR6717-201ENST00000622747 73 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 MIR6841-201ENST00000637129 72 ntBASIC1.16□□□□□ -2.22
KDM4BO94953 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
KDM4BO94953 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
KDM4BO94953 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
KDM4BO94953 MIR103A2-201ENST00000362154 78 ntBASIC1.15□□□□□ -2.23
KDM4BO94953 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
KDM4BO94953 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
KDM4BO94953 AC090844.1-201ENST00000422019 156 ntBASIC1.15□□□□□ -2.23
KDM4BO94953 HMGN1P33-201ENST00000432945 451 ntBASIC1.15□□□□□ -2.23
KDM4BO94953 TMSB4XP3-201ENST00000445144 114 ntBASIC1.15□□□□□ -2.23
KDM4BO94953 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms