Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 Y_RNA.440-201ENST00000384120 114 ntBASIC0.67□□□□□ -2.3
BEST1O76090 MT-TW-201ENST00000387382 68 ntBASIC0.67□□□□□ -2.3
BEST1O76090 SNORD83.1-201ENST00000411362 77 ntBASIC0.67□□□□□ -2.3
BEST1O76090 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
BEST1O76090 MIR18B-201ENST00000454574 71 ntBASIC0.67□□□□□ -2.3
BEST1O76090 snoU13.21-201ENST00000459368 105 ntBASIC0.67□□□□□ -2.3
BEST1O76090 MIR4771-2-201ENST00000577758 74 ntBASIC0.67□□□□□ -2.3
BEST1O76090 MIR4771-1-201ENST00000582617 74 ntBASIC0.67□□□□□ -2.3
BEST1O76090 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
BEST1O76090 Y_RNA.812-201ENST00000610788 101 ntBASIC0.67□□□□□ -2.3
BEST1O76090 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.67□□□□□ -2.3
BEST1O76090 Y_RNA.784-201ENST00000613803 101 ntBASIC0.67□□□□□ -2.3
BEST1O76090 Y_RNA.787-201ENST00000616522 101 ntBASIC0.67□□□□□ -2.3
BEST1O76090 Y_RNA.780-201ENST00000617336 101 ntBASIC0.67□□□□□ -2.3
BEST1O76090 Y_RNA.801-201ENST00000619005 101 ntBASIC0.67□□□□□ -2.3
BEST1O76090 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
BEST1O76090 Y_RNA.118-201ENST00000363300 101 ntBASIC0.66□□□□□ -2.3
BEST1O76090 Y_RNA.145-201ENST00000363527 102 ntBASIC0.66□□□□□ -2.3
BEST1O76090 Y_RNA.352-201ENST00000365439 102 ntBASIC0.66□□□□□ -2.3
BEST1O76090 Y_RNA.483-201ENST00000384380 101 ntBASIC0.66□□□□□ -2.3
BEST1O76090 MIR548F4-201ENST00000408515 105 ntBASIC0.66□□□□□ -2.3
BEST1O76090 RNU6-453P-201ENST00000516819 85 ntBASIC0.66□□□□□ -2.3
BEST1O76090 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
BEST1O76090 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
BEST1O76090 MIR520F-201ENST00000384824 87 ntBASIC0.65□□□□□ -2.31
BEST1O76090 MIR606-201ENST00000384851 96 ntBASIC0.65□□□□□ -2.31
BEST1O76090 MIR573-201ENST00000384964 99 ntBASIC0.65□□□□□ -2.31
BEST1O76090 RNU6-381P-201ENST00000391259 108 ntBASIC0.65□□□□□ -2.31
BEST1O76090 SNORA79-201ENST00000408376 140 ntBASIC0.65□□□□□ -2.31
BEST1O76090 MIR548I3-201ENST00000408378 149 ntBASIC0.65□□□□□ -2.31
BEST1O76090 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
BEST1O76090 RNU2-11P-201ENST00000459191 187 ntBASIC0.65□□□□□ -2.31
BEST1O76090 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
BEST1O76090 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
BEST1O76090 RNU6-103P-201ENST00000363686 107 ntBASIC0.64□□□□□ -2.31
BEST1O76090 Y_RNA.262-201ENST00000364641 102 ntBASIC0.64□□□□□ -2.31
BEST1O76090 RNU1-133P-201ENST00000364867 167 ntBASIC0.64□□□□□ -2.31
BEST1O76090 Y_RNA.542-201ENST00000384641 111 ntBASIC0.64□□□□□ -2.31
BEST1O76090 MIR588-201ENST00000384900 83 ntBASIC0.64□□□□□ -2.31
BEST1O76090 MIR489-201ENST00000384923 84 ntBASIC0.64□□□□□ -2.31
BEST1O76090 MIR520H-201ENST00000385126 88 ntBASIC0.64□□□□□ -2.31
BEST1O76090 RNA5SP261-201ENST00000410536 106 ntBASIC0.64□□□□□ -2.31
BEST1O76090 RNU6-602P-201ENST00000411155 105 ntBASIC0.64□□□□□ -2.31
BEST1O76090 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.64□□□□□ -2.31
BEST1O76090 snoU13.2-201ENST00000459201 104 ntBASIC0.64□□□□□ -2.31
BEST1O76090 RNU6-1132P-201ENST00000459214 107 ntBASIC0.64□□□□□ -2.31
BEST1O76090 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
BEST1O76090 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
BEST1O76090 MIR4676-201ENST00000583078 72 ntBASIC0.64□□□□□ -2.31
BEST1O76090 MIR302B-201ENST00000362188 73 ntBASIC0.63□□□□□ -2.31
BEST1O76090 RNU6-728P-201ENST00000365375 104 ntBASIC0.63□□□□□ -2.31
BEST1O76090 RNU4-45P-201ENST00000365469 141 ntBASIC0.63□□□□□ -2.31
BEST1O76090 RNU4-17P-201ENST00000365598 141 ntBASIC0.63□□□□□ -2.31
BEST1O76090 HMGN1P33-201ENST00000432945 451 ntBASIC0.63□□□□□ -2.31
BEST1O76090 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
BEST1O76090 AL117187.1-201ENST00000555482 181 ntBASIC0.63□□□□□ -2.31
BEST1O76090 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.63□□□□□ -2.31
BEST1O76090 MIR6740-201ENST00000618268 113 ntBASIC0.63□□□□□ -2.31
BEST1O76090 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
BEST1O76090 Y_RNA.7-201ENST00000362352 102 ntBASIC0.62□□□□□ -2.31
BEST1O76090 RNU6-653P-201ENST00000363074 106 ntBASIC0.62□□□□□ -2.31
BEST1O76090 RNU6-1309P-201ENST00000363305 108 ntBASIC0.62□□□□□ -2.31
BEST1O76090 Y_RNA.416-201ENST00000384014 113 ntBASIC0.62□□□□□ -2.31
BEST1O76090 RNU6-472P-201ENST00000384299 107 ntBASIC0.62□□□□□ -2.31
BEST1O76090 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
BEST1O76090 RNU6-1165P-201ENST00000410119 107 ntBASIC0.62□□□□□ -2.31
BEST1O76090 AL138752.1-201ENST00000452964 351 ntBASIC0.62□□□□□ -2.31
BEST1O76090 RNU7-80P-201ENST00000459562 61 ntBASIC0.62□□□□□ -2.31
BEST1O76090 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
BEST1O76090 Z83818.1-201ENST00000603584 150 ntBASIC0.62□□□□□ -2.31
BEST1O76090 MIR6515-201ENST00000619843 57 ntBASIC0.62□□□□□ -2.31
BEST1O76090 Y_RNA.351-201ENST00000365436 96 ntBASIC0.61□□□□□ -2.31
BEST1O76090 RNU6-1292P-201ENST00000383856 107 ntBASIC0.61□□□□□ -2.31
BEST1O76090 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
BEST1O76090 SNORA1-201ENST00000384107 130 ntBASIC0.61□□□□□ -2.31
BEST1O76090 MIR938-201ENST00000401216 83 ntBASIC0.61□□□□□ -2.31
BEST1O76090 RNU4-43P-201ENST00000410628 137 ntBASIC0.61□□□□□ -2.31
BEST1O76090 Y_RNA.618-201ENST00000410949 107 ntBASIC0.61□□□□□ -2.31
BEST1O76090 RNU6-177P-201ENST00000411257 104 ntBASIC0.61□□□□□ -2.31
BEST1O76090 RNU7-56P-201ENST00000458744 62 ntBASIC0.61□□□□□ -2.31
BEST1O76090 AC008737.2-201ENST00000599446 118 ntBASIC0.61□□□□□ -2.31
BEST1O76090 AC020891.4-201ENST00000605745 93 ntBASIC0.61□□□□□ -2.31
BEST1O76090 AL442067.1-201ENST00000613261 223 ntBASIC0.61□□□□□ -2.31
BEST1O76090 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
BEST1O76090 AC010332.2-201ENST00000613083 1904 ntBASIC0.6□□□□□ -2.31
BEST1O76090 Y_RNA.23-201ENST00000362496 106 ntBASIC0.6□□□□□ -2.31
BEST1O76090 Y_RNA.149-201ENST00000363558 117 ntBASIC0.6□□□□□ -2.31
BEST1O76090 Y_RNA.454-201ENST00000384224 113 ntBASIC0.6□□□□□ -2.31
BEST1O76090 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
BEST1O76090 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
BEST1O76090 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.6□□□□□ -2.31
BEST1O76090 MIR548H3-201ENST00000408771 118 ntBASIC0.59□□□□□ -2.31
BEST1O76090 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.59□□□□□ -2.31
BEST1O76090 AC015818.7-201ENST00000428754 109 ntBASIC0.59□□□□□ -2.31
BEST1O76090 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
BEST1O76090 AC087499.7-201ENST00000441958 109 ntBASIC0.59□□□□□ -2.31
BEST1O76090 MIR6717-201ENST00000622747 73 ntBASIC0.59□□□□□ -2.31
BEST1O76090 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
BEST1O76090 MIR342-201ENST00000362212 99 ntBASIC0.58□□□□□ -2.32
BEST1O76090 Y_RNA.47-201ENST00000362697 108 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms