Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNU6-457P-201ENST00000363999 107 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 RNU6-203P-201ENST00000384038 104 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 Y_RNA.454-201ENST00000384224 113 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 RNU6-880P-201ENST00000384526 107 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 SNORD28B-201ENST00000390993 75 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 COX6CP6-201ENST00000490840 228 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
CDKL5O76039 BX248123.2-201ENST00000606318 124 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.84□□□□□ -2.11
CDKL5O76039 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.84□□□□□ -2.11
CDKL5O76039 RNA5SP99-201ENST00000364020 114 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 MIR570-201ENST00000384917 97 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 RNU6-360P-201ENST00000390944 104 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 RNA5SP57-201ENST00000459463 123 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 RNU7-96P-201ENST00000459535 64 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 RNU7-123P-201ENST00000515911 60 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 RNU6-970P-201ENST00000516312 107 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 AL353997.5-201ENST00000618886 171 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 AP000648.3-201ENST00000623539 4507 ntBASIC1.83□□□□□ -2.12
CDKL5O76039 RNU6-755P-201ENST00000364400 103 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 Y_RNA.298-201ENST00000364960 107 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 MT-TI-201ENST00000387365 69 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 RNU6-482P-201ENST00000391068 107 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 RNU2-11P-201ENST00000459191 187 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 RNU7-164P-201ENST00000459221 62 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 SNORD123-201ENST00000459473 70 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 RNU2-35P-201ENST00000516446 142 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 SUMO2P16-201ENST00000519475 264 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 MIR548AR-201ENST00000582191 57 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 FAM106DP-201ENST00000586416 501 ntBASIC1.82□□□□□ -2.12
CDKL5O76039 Y_RNA.370-201ENST00000365589 108 ntBASIC1.81□□□□□ -2.12
CDKL5O76039 RNU6-439P-201ENST00000384188 106 ntBASIC1.81□□□□□ -2.12
CDKL5O76039 AL035398.1-201ENST00000430869 322 ntBASIC1.81□□□□□ -2.12
CDKL5O76039 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL5O76039 RNU7-45P-201ENST00000459460 63 ntBASIC1.81□□□□□ -2.12
CDKL5O76039 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL5O76039 AC022523.2-201ENST00000561045 150 ntBASIC1.81□□□□□ -2.12
CDKL5O76039 MIR4305-201ENST00000583252 102 ntBASIC1.81□□□□□ -2.12
CDKL5O76039 AC106754.2-201ENST00000623006 233 ntBASIC1.81□□□□□ -2.12
CDKL5O76039 AC095038.3-201ENST00000634439 195 ntBASIC1.81□□□□□ -2.12
CDKL5O76039 MIR302B-201ENST00000362188 73 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 Y_RNA.198-201ENST00000364013 98 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 SNORA1.2-201ENST00000365189 134 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 Y_RNA.549-201ENST00000384657 102 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 RNU6-1104P-201ENST00000384723 104 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 MIR194-1-201ENST00000384892 85 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 RNU2-13P-201ENST00000515909 113 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 RNU6-917P-201ENST00000516294 104 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 AC007012.1-201ENST00000567192 175 ntBASIC1.8□□□□□ -2.12
CDKL5O76039 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.8□□□□□ -2.12
CDKL5O76039 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
CDKL5O76039 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.79□□□□□ -2.12
CDKL5O76039 MIR517C-201ENST00000385103 95 ntBASIC1.79□□□□□ -2.12
CDKL5O76039 SNORD53B-201ENST00000577887 78 ntBASIC1.79□□□□□ -2.12
CDKL5O76039 AL035470.1-201ENST00000622571 220 ntBASIC1.79□□□□□ -2.12
CDKL5O76039 AC021613.1-201ENST00000623880 111 ntBASIC1.79□□□□□ -2.12
CDKL5O76039 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CDKL5O76039 RNU6-1123P-201ENST00000362347 106 ntBASIC1.78□□□□□ -2.12
CDKL5O76039 RNA5SP144-201ENST00000410846 116 ntBASIC1.78□□□□□ -2.12
CDKL5O76039 AC244636.1-201ENST00000421152 228 ntBASIC1.78□□□□□ -2.12
CDKL5O76039 RNU7-67P-201ENST00000459003 62 ntBASIC1.78□□□□□ -2.12
CDKL5O76039 AC107297.1-201ENST00000459991 176 ntBASIC1.78□□□□□ -2.12
CDKL5O76039 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.78□□□□□ -2.12
CDKL5O76039 RNU6-958P-201ENST00000516995 106 ntBASIC1.78□□□□□ -2.12
CDKL5O76039 Y_RNA.213-201ENST00000364178 111 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 Y_RNA.281-201ENST00000364774 94 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 SNORA24-201ENST00000384096 131 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 RNU6-1190P-201ENST00000410811 104 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 AC004965.1-201ENST00000413033 213 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 AL161935.2-201ENST00000414627 60 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 RPS29P29-201ENST00000456396 171 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 RNU1-98P-201ENST00000458992 160 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 SNORA74.3-201ENST00000517108 154 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 uc_338.28-201ENST00000612082 187 ntBASIC1.77□□□□□ -2.13
CDKL5O76039 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDKL5O76039 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
CDKL5O76039 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.76□□□□□ -2.13
CDKL5O76039 RNU6-147P-201ENST00000383983 107 ntBASIC1.76□□□□□ -2.13
CDKL5O76039 SNORA70.7-201ENST00000384159 133 ntBASIC1.76□□□□□ -2.13
CDKL5O76039 SNORD12C-201ENST00000386307 89 ntBASIC1.76□□□□□ -2.13
CDKL5O76039 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CDKL5O76039 RNU6-913P-201ENST00000390913 95 ntBASIC1.76□□□□□ -2.13
CDKL5O76039 RNA5SP212-201ENST00000391223 107 ntBASIC1.76□□□□□ -2.13
CDKL5O76039 MIR4791-201ENST00000607666 84 ntBASIC1.76□□□□□ -2.13
CDKL5O76039 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.76□□□□□ -2.13
CDKL5O76039 AC243994.1-201ENST00000618627 109 ntBASIC1.76□□□□□ -2.13
CDKL5O76039 WWP1P1-201ENST00000466609 2769 ntBASIC1.75□□□□□ -2.13
CDKL5O76039 Y_RNA.85-201ENST00000363014 111 ntBASIC1.75□□□□□ -2.13
CDKL5O76039 RNU6-414P-201ENST00000363705 104 ntBASIC1.75□□□□□ -2.13
CDKL5O76039 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
CDKL5O76039 MIR1304-201ENST00000408243 91 ntBASIC1.75□□□□□ -2.13
CDKL5O76039 POLR2J4-204ENST00000418424 324 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms