Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MIR548I3-201ENST00000408378 149 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 RNU6-130P-201ENST00000411112 103 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 AL160004.2-201ENST00000432935 350 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 U8.20-201ENST00000459445 131 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 SNORA31.14-201ENST00000516728 116 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 SNORD58B-201ENST00000607313 66 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.15□□□□□ -2.43
NPHP4O75161 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 RNU6-144P-201ENST00000383951 107 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 RNU6-514P-201ENST00000384208 107 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 RNY4P36-201ENST00000391116 96 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 RNA5SP266-201ENST00000410273 108 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 RPS29P8-201ENST00000445109 171 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 SEPT14P8-201ENST00000508026 178 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 RNA5SP67-201ENST00000516422 131 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 AC131281.1-201ENST00000522984 164 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.15□□□□□ -2.43
NPHP4O75161 PART1_1.1-201ENST00000611761 217 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 MIR499B-201ENST00000636498 73 ntBASIC-0.15□□□□□ -2.43
NPHP4O75161 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 MIR145-201ENST00000384967 88 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 MIR760-201ENST00000390220 80 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 RPL39P25-201ENST00000449384 154 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 SNORD77.4-201ENST00000516158 81 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 AC100767.1-201ENST00000528178 123 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 MIR4752-201ENST00000579672 72 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 AL133255.1-201ENST00000606374 441 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 SNORD113-5-201ENST00000607261 78 ntBASIC-0.16□□□□□ -2.44
NPHP4O75161 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.16□□□□□ -2.44
NPHP4O75161 SNORD114-28-201ENST00000363610 72 ntBASIC-0.17□□□□□ -2.44
NPHP4O75161 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.17□□□□□ -2.44
NPHP4O75161 SNORD77.3-201ENST00000391113 65 ntBASIC-0.17□□□□□ -2.44
NPHP4O75161 AF228730.3-201ENST00000436691 102 ntBASIC-0.17□□□□□ -2.44
NPHP4O75161 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.17□□□□□ -2.44
NPHP4O75161 AC013791.1-201ENST00000616619 62 ntBASIC-0.17□□□□□ -2.44
NPHP4O75161 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.17□□□□□ -2.44
NPHP4O75161 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 RNU4-10P-201ENST00000364383 140 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 RNU6-102P-201ENST00000384485 104 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 MIR610-201ENST00000385139 96 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
NPHP4O75161 U8.15-201ENST00000390947 134 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 FGF7P6-202ENST00000451282 293 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 snoU13.11-201ENST00000459219 104 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 RNU6-998P-201ENST00000515894 101 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 RNU6-277P-201ENST00000516272 106 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 RNU2-31P-201ENST00000516954 155 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.18□□□□□ -2.44
NPHP4O75161 AC092794.1-201ENST00000612734 582 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 MIR6082-201ENST00000613604 109 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 AL606534.2-204ENST00000635008 178 ntBASIC-0.18□□□□□ -2.44
NPHP4O75161 MIR367-201ENST00000362299 68 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 SNORD113-8-201ENST00000363497 74 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 RNA5SP496-201ENST00000391240 109 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 RNA5SP237-201ENST00000410414 113 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 RNU6-504P-201ENST00000516568 104 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 MIR4724-201ENST00000579485 89 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 MIR6717-201ENST00000622747 73 ntBASIC-0.19□□□□□ -2.44
NPHP4O75161 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 SNORD49B-201ENST00000365172 72 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 SNORA26.6-201ENST00000391256 115 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 RNU7-96P-201ENST00000459535 64 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 RNU6-397P-201ENST00000516226 104 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 SNORA40.14-201ENST00000516543 86 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 MTND5P34-201ENST00000568888 325 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 MIR5692C2-201ENST00000577959 77 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 MIR6828-201ENST00000636181 60 ntBASIC-0.2□□□□□ -2.44
NPHP4O75161 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 SNORA72.6-201ENST00000384520 129 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.21□□□□□ -2.44
NPHP4O75161 MTCO2P24-201ENST00000515611 426 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 RNU6-365P-201ENST00000517113 106 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 RNA5SP47-201ENST00000517230 109 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 MIR4491-201ENST00000581087 68 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 C8orf59P2-201ENST00000603441 271 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 AL662814.1-201ENST00000617364 121 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 RNU6-46P-201ENST00000383860 107 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 SNORD28-201ENST00000384706 75 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 MIR548H2-201ENST00000408874 88 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 RNA5SP451-201ENST00000410588 110 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms