Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SNORD45.4-201ENST00000516629 73 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 MIR4709-201ENST00000577272 72 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 MIR4422-201ENST00000581938 83 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 AC011603.4-201ENST00000611325 277 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 Y_RNA.37-201ENST00000362606 108 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 Y_RNA.336-201ENST00000365307 109 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 MIR802-201ENST00000390235 94 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 AC093850.1-201ENST00000454121 251 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 RNU7-107P-201ENST00000459121 61 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 RNU2-11P-201ENST00000459191 187 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 RNVU1-2-201ENST00000516326 135 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 RNU7-70P-201ENST00000516941 66 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 AL160236.1-201ENST00000556317 195 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.3□□□□□ -2.2
CACNA1FO60840 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.3□□□□□ -2.2
CACNA1FO60840 RNU6-1290P-201ENST00000362957 109 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 MIR516B2-201ENST00000385190 85 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.29□□□□□ -2.2
CACNA1FO60840 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 AF228730.3-201ENST00000436691 102 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 HSPE1P9-201ENST00000440046 311 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 SUMO2P16-201ENST00000519475 264 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 MIR151B-201ENST00000584249 96 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.29□□□□□ -2.2
CACNA1FO60840 PVT1_3.1-201ENST00000620853 95 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 MIR6079-201ENST00000635807 62 ntBASIC1.29□□□□□ -2.2
CACNA1FO60840 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.28□□□□□ -2.2
CACNA1FO60840 RNU6-349P-201ENST00000362402 107 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 RNU6-268P-201ENST00000364174 107 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 Y_RNA.273-201ENST00000364703 102 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 HMGN2P32-201ENST00000444648 269 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.28□□□□□ -2.2
CACNA1FO60840 AC108081.1-201ENST00000604358 221 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 SNORD114-21-201ENST00000606412 72 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 AL137067.1-201ENST00000615933 120 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 Y_RNA.346-201ENST00000365385 112 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 Y_RNA.366-201ENST00000365540 102 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 SNORD116-14-201ENST00000383894 92 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 SNORD116-17-201ENST00000383929 92 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 RNU6-42P-201ENST00000384165 107 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 SNORA27-201ENST00000384323 126 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 SNORD116-15-201ENST00000384445 92 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 SNORD116-19-201ENST00000384729 92 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 U8.17-201ENST00000391292 132 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 RPS29P1-201ENST00000465274 159 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 RPS26P48-201ENST00000491713 339 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 RNU6-113P-201ENST00000516653 101 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 AC015726.2-201ENST00000620112 122 ntBASIC1.28□□□□□ -2.2
CACNA1FO60840 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CACNA1FO60840 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CACNA1FO60840 Y_RNA.49-201ENST00000362714 112 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNU6-690P-201ENST00000365242 106 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 SNORA2.2-201ENST00000365473 135 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 Y_RNA.494-201ENST00000384432 111 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 MIR136-201ENST00000385207 82 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNU1-78P-201ENST00000391248 165 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNA5SP100-201ENST00000410903 110 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNA5SP59-201ENST00000410922 110 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 STAG3L5P-204ENST00000443759 179 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNU6-998P-201ENST00000515894 101 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 AP003484.1-201ENST00000530974 250 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 MIR5197-201ENST00000583721 112 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CACNA1FO60840 RNY1P11-201ENST00000363759 113 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNU6-978P-201ENST00000364371 103 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNU6-342P-201ENST00000384521 104 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNU6-1031P-201ENST00000384773 107 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 CALM2P4-201ENST00000430810 426 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 PGBD4P5-201ENST00000445958 426 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 RNU5E-3P-201ENST00000515913 68 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 Y_RNA.690-201ENST00000516603 95 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 SNORA18.7-201ENST00000516910 131 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 MTND5P34-201ENST00000568888 325 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 MIR4285-201ENST00000581001 85 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 AL022345.2-201ENST00000606307 135 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 AC095038.3-201ENST00000634439 195 ntBASIC1.27□□□□□ -2.21
CACNA1FO60840 Y_RNA.85-201ENST00000363014 111 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 SNORA1.2-201ENST00000365189 134 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 MIR194-1-201ENST00000384892 85 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 MIR570-201ENST00000384917 97 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 MIR532-201ENST00000385025 91 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 MIR548J-201ENST00000408833 112 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 SNORD33.1-201ENST00000516213 88 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 RNU6-919P-201ENST00000516731 104 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.26□□□□□ -2.21
CACNA1FO60840 AL513423.1-201ENST00000621695 132 ntBASIC1.26□□□□□ -2.21
CACNA1FO60840 RNU6-888P-201ENST00000363010 101 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 RNU6-414P-201ENST00000363705 104 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 SNORD114-27-201ENST00000363766 70 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 RNU6-1292P-201ENST00000383856 107 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 MIR526A1-201ENST00000384897 85 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 MIR452-201ENST00000385020 85 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms