Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX2O60749 AC019288.1-201ENST00000557918 224 ntBASIC1.48□□□□□ -2.17
SNX2O60749 AL512598.1-201ENST00000610158 273 ntBASIC1.48□□□□□ -2.17
SNX2O60749 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
SNX2O60749 MIR4251-201ENST00000635819 61 ntBASIC1.48□□□□□ -2.17
SNX2O60749 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SNX2O60749 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
SNX2O60749 Y_RNA.488-201ENST00000384403 102 ntBASIC1.47□□□□□ -2.17
SNX2O60749 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
SNX2O60749 RNU6-913P-201ENST00000390913 95 ntBASIC1.47□□□□□ -2.17
SNX2O60749 MIR513C-201ENST00000401352 84 ntBASIC1.47□□□□□ -2.17
SNX2O60749 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
SNX2O60749 RNU6-998P-201ENST00000515894 101 ntBASIC1.47□□□□□ -2.17
SNX2O60749 RNA5SP236-201ENST00000516169 116 ntBASIC1.47□□□□□ -2.17
SNX2O60749 RNU6-426P-201ENST00000516464 97 ntBASIC1.47□□□□□ -2.17
SNX2O60749 RNU6-187P-201ENST00000384139 106 ntBASIC1.46□□□□□ -2.18
SNX2O60749 AL035398.1-201ENST00000430869 322 ntBASIC1.46□□□□□ -2.18
SNX2O60749 AC009474.2-201ENST00000451383 136 ntBASIC1.46□□□□□ -2.18
SNX2O60749 RPL39P39-201ENST00000455840 151 ntBASIC1.46□□□□□ -2.18
SNX2O60749 RNU2-11P-201ENST00000459191 187 ntBASIC1.46□□□□□ -2.18
SNX2O60749 RNU7-96P-201ENST00000459535 64 ntBASIC1.46□□□□□ -2.18
SNX2O60749 AC108729.3-201ENST00000513484 108 ntBASIC1.46□□□□□ -2.18
SNX2O60749 MIR548AO-201ENST00000579992 96 ntBASIC1.46□□□□□ -2.18
SNX2O60749 AC091932.4-201ENST00000623386 200 ntBASIC1.46□□□□□ -2.18
SNX2O60749 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SNX2O60749 AL596211.1-201ENST00000569873 2277 ntBASIC1.45□□□□□ -2.18
SNX2O60749 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.45□□□□□ -2.18
SNX2O60749 RNU6-746P-201ENST00000384112 109 ntBASIC1.45□□□□□ -2.18
SNX2O60749 RNU6-939P-201ENST00000384634 107 ntBASIC1.45□□□□□ -2.18
SNX2O60749 RNU6-1067P-201ENST00000384752 107 ntBASIC1.45□□□□□ -2.18
SNX2O60749 RNU6-1190P-201ENST00000410811 104 ntBASIC1.45□□□□□ -2.18
SNX2O60749 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
SNX2O60749 RNU7-95P-201ENST00000459222 64 ntBASIC1.45□□□□□ -2.18
SNX2O60749 RNU7-45P-201ENST00000459460 63 ntBASIC1.45□□□□□ -2.18
SNX2O60749 AC048334.1-201ENST00000477975 159 ntBASIC1.45□□□□□ -2.18
SNX2O60749 HSPE1P19-201ENST00000603327 295 ntBASIC1.45□□□□□ -2.18
SNX2O60749 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SNX2O60749 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
SNX2O60749 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.44□□□□□ -2.18
SNX2O60749 Y_RNA.420-201ENST00000384043 110 ntBASIC1.44□□□□□ -2.18
SNX2O60749 MIR1302-7-201ENST00000408841 72 ntBASIC1.44□□□□□ -2.18
SNX2O60749 Y_RNA.703-201ENST00000516846 111 ntBASIC1.44□□□□□ -2.18
SNX2O60749 AP003716.2-201ENST00000528260 108 ntBASIC1.44□□□□□ -2.18
SNX2O60749 ZNF209P-201ENST00000593450 2304 ntBASIC1.44□□□□□ -2.18
SNX2O60749 RNA5SP327-201ENST00000362494 101 ntBASIC1.43□□□□□ -2.18
SNX2O60749 RNU6-309P-201ENST00000364573 106 ntBASIC1.43□□□□□ -2.18
SNX2O60749 SNORA70.7-201ENST00000384159 133 ntBASIC1.43□□□□□ -2.18
SNX2O60749 HMGN1P33-201ENST00000432945 451 ntBASIC1.43□□□□□ -2.18
SNX2O60749 RNU7-80P-201ENST00000459562 61 ntBASIC1.43□□□□□ -2.18
SNX2O60749 AL133373.1-201ENST00000497098 94 ntBASIC1.43□□□□□ -2.18
SNX2O60749 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
SNX2O60749 Y_RNA.120-201ENST00000363304 110 ntBASIC1.42□□□□□ -2.18
SNX2O60749 RNA5SP48-201ENST00000363969 126 ntBASIC1.42□□□□□ -2.18
SNX2O60749 Y_RNA.363-201ENST00000365529 113 ntBASIC1.42□□□□□ -2.18
SNX2O60749 Y_RNA.568-201ENST00000384742 113 ntBASIC1.42□□□□□ -2.18
SNX2O60749 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
SNX2O60749 MIR548M-201ENST00000408260 86 ntBASIC1.42□□□□□ -2.18
SNX2O60749 MIR1185-1-201ENST00000408598 86 ntBASIC1.42□□□□□ -2.18
SNX2O60749 RNU6-1054P-201ENST00000411293 104 ntBASIC1.42□□□□□ -2.18
SNX2O60749 AC090844.1-201ENST00000422019 156 ntBASIC1.42□□□□□ -2.18
SNX2O60749 RNU7-73P-201ENST00000458743 63 ntBASIC1.42□□□□□ -2.18
SNX2O60749 Y_RNA.651-201ENST00000459380 103 ntBASIC1.42□□□□□ -2.18
SNX2O60749 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.42□□□□□ -2.18
SNX2O60749 SNORA31.2-201ENST00000516019 134 ntBASIC1.42□□□□□ -2.18
SNX2O60749 snoU13.31-201ENST00000607291 104 ntBASIC1.42□□□□□ -2.18
SNX2O60749 MIR302B-201ENST00000362188 73 ntBASIC1.41□□□□□ -2.18
SNX2O60749 RNU1-133P-201ENST00000364867 167 ntBASIC1.41□□□□□ -2.18
SNX2O60749 RNU6-915P-201ENST00000364943 103 ntBASIC1.41□□□□□ -2.18
SNX2O60749 AC245047.7-201ENST00000440265 293 ntBASIC1.41□□□□□ -2.18
SNX2O60749 snoU13.16-201ENST00000459350 104 ntBASIC1.41□□□□□ -2.18
SNX2O60749 Y_RNA.690-201ENST00000516603 95 ntBASIC1.41□□□□□ -2.18
SNX2O60749 RNU7-53P-201ENST00000516705 60 ntBASIC1.41□□□□□ -2.18
SNX2O60749 RNU7-70P-201ENST00000516941 66 ntBASIC1.41□□□□□ -2.18
SNX2O60749 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
SNX2O60749 MIR4498-201ENST00000577599 66 ntBASIC1.41□□□□□ -2.18
SNX2O60749 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.41□□□□□ -2.18
SNX2O60749 PRELID3BP2-201ENST00000605362 201 ntBASIC1.41□□□□□ -2.18
SNX2O60749 AL020996.3-201ENST00000606617 222 ntBASIC1.41□□□□□ -2.18
SNX2O60749 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
SNX2O60749 RNA5SP264-201ENST00000363115 107 ntBASIC1.4□□□□□ -2.19
SNX2O60749 Y_RNA.343-201ENST00000365354 112 ntBASIC1.4□□□□□ -2.19
SNX2O60749 Y_RNA.454-201ENST00000384224 113 ntBASIC1.4□□□□□ -2.19
SNX2O60749 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
SNX2O60749 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.4□□□□□ -2.19
SNX2O60749 MIR8055-201ENST00000610739 97 ntBASIC1.4□□□□□ -2.19
SNX2O60749 AC010332.2-201ENST00000613083 1904 ntBASIC1.4□□□□□ -2.19
SNX2O60749 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
SNX2O60749 Y_RNA.294-201ENST00000364916 102 ntBASIC1.39□□□□□ -2.19
SNX2O60749 SNORD18B-201ENST00000365659 72 ntBASIC1.39□□□□□ -2.19
SNX2O60749 SNORA26.6-201ENST00000391256 115 ntBASIC1.39□□□□□ -2.19
SNX2O60749 AL603914.1-201ENST00000401964 204 ntBASIC1.39□□□□□ -2.19
SNX2O60749 RNU6-257P-201ENST00000410238 98 ntBASIC1.39□□□□□ -2.19
SNX2O60749 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.39□□□□□ -2.19
SNX2O60749 AL392103.1-201ENST00000447000 198 ntBASIC1.39□□□□□ -2.19
SNX2O60749 RNU5E-3P-201ENST00000515913 68 ntBASIC1.39□□□□□ -2.19
SNX2O60749 RNU6-1053P-201ENST00000515930 101 ntBASIC1.39□□□□□ -2.19
SNX2O60749 RNU7-40P-201ENST00000516397 64 ntBASIC1.39□□□□□ -2.19
SNX2O60749 AP001328.1-201ENST00000528550 176 ntBASIC1.39□□□□□ -2.19
SNX2O60749 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.39□□□□□ -2.19
SNX2O60749 AL022345.2-201ENST00000606307 135 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms