Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 U2.22-201ENST00000636441 106 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KDM1AO60341 RNU4-16P-201ENST00000364737 141 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 SNORD116-14-201ENST00000383894 92 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 SNORD116-17-201ENST00000383929 92 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 SNORD116-15-201ENST00000384445 92 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 SNORD116-19-201ENST00000384729 92 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 DNAJC19P9-201ENST00000555084 351 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 AP000648.3-201ENST00000623539 4507 ntBASIC1.72□□□□□ -2.13
KDM1AO60341 RNU6-235P-201ENST00000362644 107 ntBASIC1.71□□□□□ -2.14
KDM1AO60341 Y_RNA.71-201ENST00000362892 104 ntBASIC1.71□□□□□ -2.14
KDM1AO60341 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
KDM1AO60341 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
KDM1AO60341 RNU6-165P-201ENST00000517170 99 ntBASIC1.71□□□□□ -2.14
KDM1AO60341 RNU6-902P-201ENST00000517212 91 ntBASIC1.71□□□□□ -2.14
KDM1AO60341 AC133485.4-201ENST00000561835 220 ntBASIC1.71□□□□□ -2.14
KDM1AO60341 AC138907.4-201ENST00000570107 226 ntBASIC1.71□□□□□ -2.14
KDM1AO60341 AC021613.1-201ENST00000623880 111 ntBASIC1.71□□□□□ -2.14
KDM1AO60341 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
KDM1AO60341 Y_RNA.366-201ENST00000365540 102 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KDM1AO60341 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 MIR1289-2-201ENST00000408360 111 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 RNA5SP261-201ENST00000410536 106 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.7□□□□□ -2.14
KDM1AO60341 AL606753.1-201ENST00000427435 87 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 AC008267.6-201ENST00000441664 139 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 AC009474.2-201ENST00000451383 136 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 RNU7-45P-201ENST00000459460 63 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 RNU6-1234P-201ENST00000516877 103 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 MIR548AO-201ENST00000579992 96 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 HSPE1P19-201ENST00000603327 295 ntBASIC1.7□□□□□ -2.14
KDM1AO60341 RNU6-1319P-201ENST00000390855 104 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 RNU6-747P-201ENST00000390928 104 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 RNU6-241P-201ENST00000391148 104 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 RNU6-1190P-201ENST00000410811 104 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 RNU6-177P-201ENST00000411257 104 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 RNU6-62P-201ENST00000516526 102 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 AL137067.1-201ENST00000615933 120 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 AL121890.5-201ENST00000620848 304 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 MIR7843-201ENST00000622274 79 ntBASIC1.69□□□□□ -2.14
KDM1AO60341 Y_RNA.127-201ENST00000363386 109 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 SNORA1.1-201ENST00000364671 133 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 RNU6-22P-201ENST00000384355 107 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 SNORA26.6-201ENST00000391256 115 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 Y_RNA.617-201ENST00000410920 90 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.68□□□□□ -2.14
KDM1AO60341 RNU6-772P-201ENST00000516042 105 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 RN7SKP179-201ENST00000516126 217 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.68□□□□□ -2.14
KDM1AO60341 MIR3683-201ENST00000580847 82 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 AC021443.1-201ENST00000604478 211 ntBASIC1.68□□□□□ -2.14
KDM1AO60341 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KDM1AO60341 HMGN1P33-201ENST00000432945 451 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 snoU13.23-201ENST00000458863 104 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 snoU13.25-201ENST00000458945 104 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 RNU7-107P-201ENST00000459121 61 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 RN7SKP19-201ENST00000516016 252 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 RNU6-1333P-201ENST00000516162 93 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 MIR3152-201ENST00000579801 74 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 MIR6715A-201ENST00000615929 79 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 MIR6717-201ENST00000622747 73 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 MIR6841-201ENST00000637129 72 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 Z97988.1-201ENST00000637697 135 ntBASIC1.67□□□□□ -2.14
KDM1AO60341 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KDM1AO60341 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.66□□□□□ -2.14
KDM1AO60341 SNORD58C-201ENST00000365223 64 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 RNA5SP144-201ENST00000410846 116 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.66□□□□□ -2.14
KDM1AO60341 AL133373.1-201ENST00000497098 94 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 RNU6-479P-201ENST00000516348 105 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 RNU6-659P-201ENST00000516454 104 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 RNU6-1061P-201ENST00000516530 99 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 IGKV1-22-201ENST00000524313 326 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 CYP3A52P-201ENST00000563326 91 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 MIR4305-201ENST00000583252 102 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 MIR8055-201ENST00000610739 97 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 AL365222.1-201ENST00000614661 98 ntBASIC1.66□□□□□ -2.14
KDM1AO60341 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KDM1AO60341 SNORA25.3-201ENST00000363205 127 ntBASIC1.65□□□□□ -2.15
KDM1AO60341 Y_RNA.430-201ENST00000384081 110 ntBASIC1.65□□□□□ -2.15
KDM1AO60341 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.65□□□□□ -2.15
KDM1AO60341 RNU6-893P-201ENST00000458841 100 ntBASIC1.65□□□□□ -2.15
KDM1AO60341 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
KDM1AO60341 AC108210.2-201ENST00000503681 201 ntBASIC1.65□□□□□ -2.15
KDM1AO60341 Y_RNA.712-201ENST00000517011 92 ntBASIC1.65□□□□□ -2.15
KDM1AO60341 SNORA22.1-201ENST00000362701 134 ntBASIC1.64□□□□□ -2.15
KDM1AO60341 RNU6-955P-201ENST00000410497 104 ntBASIC1.64□□□□□ -2.15
KDM1AO60341 RNU2-51P-201ENST00000410708 197 ntBASIC1.64□□□□□ -2.15
KDM1AO60341 RPS3AP1-201ENST00000413190 320 ntBASIC1.64□□□□□ -2.15
KDM1AO60341 AL591806.2-201ENST00000433122 173 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms