Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL121890.5-201ENST00000620848 304 ntBASIC1.21□□□□□ -2.22
PRKNO60260 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.21□□□□□ -2.22
PRKNO60260 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.21□□□□□ -2.22
PRKNO60260 SNORD115-34-201ENST00000362441 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-12-201ENST00000362583 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 Y_RNA.52-201ENST00000362760 96 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-29-201ENST00000362834 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-9-201ENST00000362912 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-21-201ENST00000362963 81 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-14-201ENST00000363090 81 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-13-201ENST00000363358 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-41-201ENST00000363608 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-11-201ENST00000363616 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-5-201ENST00000363633 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-39-201ENST00000363694 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-4-201ENST00000363810 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-16-201ENST00000363887 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-6-201ENST00000363942 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-42-201ENST00000364273 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 Y_RNA.224-201ENST00000364308 111 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-15-201ENST00000364809 81 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-1-201ENST00000364961 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-26-201ENST00000365067 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-10-201ENST00000365073 81 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-43-201ENST00000365503 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-36-201ENST00000365629 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
PRKNO60260 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
PRKNO60260 SNORA40.5-201ENST00000391061 128 ntBASIC1.2□□□□□ -2.22
PRKNO60260 Y_RNA.586-201ENST00000391146 98 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
PRKNO60260 RPL39P39-201ENST00000455840 151 ntBASIC1.2□□□□□ -2.22
PRKNO60260 AC107297.1-201ENST00000459991 176 ntBASIC1.2□□□□□ -2.22
PRKNO60260 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
PRKNO60260 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.2□□□□□ -2.22
PRKNO60260 MIR5197-201ENST00000583721 112 ntBASIC1.2□□□□□ -2.22
PRKNO60260 AC131055.1-201ENST00000584626 316 ntBASIC1.2□□□□□ -2.22
PRKNO60260 MIR3192-201ENST00000584920 77 ntBASIC1.2□□□□□ -2.22
PRKNO60260 SNORD115-40-201ENST00000606510 82 ntBASIC1.2□□□□□ -2.22
PRKNO60260 MIR4791-201ENST00000607666 84 ntBASIC1.2□□□□□ -2.22
PRKNO60260 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
PRKNO60260 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
PRKNO60260 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
PRKNO60260 AC008133.2-201ENST00000624540 351 ntBASIC1.2□□□□□ -2.22
PRKNO60260 AC132825.6-201ENST00000638861 357 ntBASIC1.2□□□□□ -2.22
PRKNO60260 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PRKNO60260 AL157777.2-201ENST00000258070 137 ntBASIC1.19□□□□□ -2.22
PRKNO60260 MIR342-201ENST00000362212 99 ntBASIC1.19□□□□□ -2.22
PRKNO60260 SNORA27-201ENST00000384323 126 ntBASIC1.19□□□□□ -2.22
PRKNO60260 RNU6-1067P-201ENST00000384752 107 ntBASIC1.19□□□□□ -2.22
PRKNO60260 SNORA40-201ENST00000388090 126 ntBASIC1.19□□□□□ -2.22
PRKNO60260 Y_RNA.584-201ENST00000391090 114 ntBASIC1.19□□□□□ -2.22
PRKNO60260 MTND4LP9-201ENST00000427694 174 ntBASIC1.19□□□□□ -2.22
PRKNO60260 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
PRKNO60260 RNU2-60P-201ENST00000517290 128 ntBASIC1.19□□□□□ -2.22
PRKNO60260 CYP3A52P-201ENST00000563326 91 ntBASIC1.19□□□□□ -2.22
PRKNO60260 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
PRKNO60260 AC091895.1-201ENST00000624494 256 ntBASIC1.19□□□□□ -2.22
PRKNO60260 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
PRKNO60260 Y_RNA.116-201ENST00000363292 103 ntBASIC1.18□□□□□ -2.22
PRKNO60260 RNU6-915P-201ENST00000364943 103 ntBASIC1.18□□□□□ -2.22
PRKNO60260 SNORD113-1-201ENST00000365321 69 ntBASIC1.18□□□□□ -2.22
PRKNO60260 Y_RNA.440-201ENST00000384120 114 ntBASIC1.18□□□□□ -2.22
PRKNO60260 SNORA51.10-201ENST00000384418 136 ntBASIC1.18□□□□□ -2.22
PRKNO60260 MIR518E-201ENST00000385252 88 ntBASIC1.18□□□□□ -2.22
PRKNO60260 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
PRKNO60260 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
PRKNO60260 RNU7-67P-201ENST00000459003 62 ntBASIC1.18□□□□□ -2.22
PRKNO60260 RPS29P24-201ENST00000486345 171 ntBASIC1.18□□□□□ -2.22
PRKNO60260 Y_RNA.686-201ENST00000516548 134 ntBASIC1.18□□□□□ -2.22
PRKNO60260 AP001328.1-201ENST00000528550 176 ntBASIC1.18□□□□□ -2.22
PRKNO60260 AC243994.1-201ENST00000618627 109 ntBASIC1.18□□□□□ -2.22
PRKNO60260 AP001340.1-201ENST00000624405 217 ntBASIC1.18□□□□□ -2.22
PRKNO60260 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
PRKNO60260 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.18□□□□□ -2.22
PRKNO60260 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
PRKNO60260 Y_RNA.120-201ENST00000363304 110 ntBASIC1.17□□□□□ -2.22
PRKNO60260 RNU6-81P-201ENST00000365608 104 ntBASIC1.17□□□□□ -2.22
PRKNO60260 Y_RNA.537-201ENST00000384626 109 ntBASIC1.17□□□□□ -2.22
PRKNO60260 SNORA19-201ENST00000384737 128 ntBASIC1.17□□□□□ -2.22
PRKNO60260 SCARNA15-202ENST00000516881 127 ntBASIC1.17□□□□□ -2.22
PRKNO60260 MIR4251-201ENST00000635819 61 ntBASIC1.17□□□□□ -2.22
PRKNO60260 MTND5P32-201ENST00000560711 1802 ntBASIC1.17□□□□□ -2.22
PRKNO60260 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PRKNO60260 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.16□□□□□ -2.22
PRKNO60260 SNORA25.3-201ENST00000363205 127 ntBASIC1.16□□□□□ -2.22
PRKNO60260 RNU6-392P-201ENST00000364926 101 ntBASIC1.16□□□□□ -2.22
PRKNO60260 RNU6-53P-201ENST00000365367 106 ntBASIC1.16□□□□□ -2.22
PRKNO60260 Y_RNA.351-201ENST00000365436 96 ntBASIC1.16□□□□□ -2.22
PRKNO60260 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
PRKNO60260 MIR150-201ENST00000385048 84 ntBASIC1.16□□□□□ -2.22
PRKNO60260 RNU2-13P-201ENST00000515909 113 ntBASIC1.16□□□□□ -2.22
PRKNO60260 RNA5SP236-201ENST00000516169 116 ntBASIC1.16□□□□□ -2.22
PRKNO60260 RNU6-1149P-201ENST00000516810 97 ntBASIC1.16□□□□□ -2.22
PRKNO60260 RNU6-958P-201ENST00000516995 106 ntBASIC1.16□□□□□ -2.22
PRKNO60260 U7.2-201ENST00000607576 63 ntBASIC1.16□□□□□ -2.22
PRKNO60260 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.16□□□□□ -2.22
PRKNO60260 U2.22-201ENST00000636441 106 ntBASIC1.16□□□□□ -2.22
PRKNO60260 snoU13.25-201ENST00000458945 104 ntBASIC1.15□□□□□ -2.23
PRKNO60260 RNU6-971P-201ENST00000516920 106 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms