Protein–RNA interactions for Protein: O43617

TRAPPC3, Trafficking protein particle complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3O43617 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAPPC3O43617 MIR4752-201ENST00000579672 72 ntBASIC-0.18□□□□□ -2.44
TRAPPC3O43617 AL662814.1-201ENST00000617364 121 ntBASIC-0.18□□□□□ -2.44
TRAPPC3O43617 AL606534.2-204ENST00000635008 178 ntBASIC-0.18□□□□□ -2.44
TRAPPC3O43617 MIR376A2-201ENST00000636782 80 ntBASIC-0.18□□□□□ -2.44
TRAPPC3O43617 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
TRAPPC3O43617 RNU6-291P-201ENST00000384720 107 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 MIR760-201ENST00000390220 80 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 AC023449.1-201ENST00000454464 154 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 RPL39P34-201ENST00000477141 156 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 RNU6-469P-201ENST00000516253 101 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 RNU6-782P-201ENST00000516852 104 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 AC100767.1-201ENST00000528178 123 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 MIR4743-201ENST00000584576 69 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 AC091304.10-201ENST00000641554 121 ntBASIC-0.19□□□□□ -2.44
TRAPPC3O43617 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 RNU6-504P-201ENST00000516568 104 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 RNU6-765P-201ENST00000516916 99 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 MTND5P34-201ENST00000568888 325 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 MIR4662B-201ENST00000579498 81 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 MIR4639-201ENST00000584938 69 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 RPS29P30-201ENST00000600975 111 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 AC244669.1-204ENST00000621564 178 ntBASIC-0.2□□□□□ -2.44
TRAPPC3O43617 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.2□□□□□ -2.44
TRAPPC3O43617 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 RNU6-403P-201ENST00000363163 104 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 RNA5SP245-201ENST00000364239 121 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 RNU1-115P-201ENST00000365329 160 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 RNU6-876P-201ENST00000391295 104 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 PMCHL1-202ENST00000423102 261 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 RNU6-365P-201ENST00000517113 106 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 MIR3152-201ENST00000579801 74 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 AC133104.2-201ENST00000615272 193 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRAPPC3O43617 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.21□□□□□ -2.44
TRAPPC3O43617 RNU6-653P-201ENST00000363074 106 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 SNORD113-8-201ENST00000363497 74 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 RNU4-40P-201ENST00000364351 143 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 SNORA20.3-201ENST00000516880 132 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 AP003733.2-201ENST00000529409 171 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.22□□□□□ -2.44
TRAPPC3O43617 AC141846.1-201ENST00000568348 142 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 MIR4724-201ENST00000579485 89 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 AL133255.1-201ENST00000606374 441 ntBASIC-0.22□□□□□ -2.44
TRAPPC3O43617 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 RNU4-10P-201ENST00000364383 140 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 RNU6-484P-201ENST00000384016 107 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 RNU6V-201ENST00000384105 107 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
TRAPPC3O43617 SNORD115-46-201ENST00000390982 71 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 RNU7-165P-201ENST00000458864 60 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 RNU6-135P-201ENST00000516769 101 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.23□□□□□ -2.45
TRAPPC3O43617 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.23□□□□□ -2.45
TRAPPC3O43617 MIR342-201ENST00000362212 99 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 RNU6-949P-201ENST00000384040 107 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 SNORA1-201ENST00000384107 130 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 RNU6-535P-201ENST00000384722 107 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 MIR526A2-201ENST00000390198 65 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 MIR501-201ENST00000390204 84 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 RNU7-129P-201ENST00000516128 62 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 SNORA25.16-201ENST00000516741 121 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 AC040926.1-201ENST00000530195 238 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 AC138869.1-201ENST00000568623 124 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 AL008718.3-201ENST00000610217 321 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAPPC3O43617 AC007485.1-201ENST00000616755 206 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 MIR6841-201ENST00000637129 72 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 MIR6759-201ENST00000638110 65 ntBASIC-0.24□□□□□ -2.45
TRAPPC3O43617 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.25□□□□□ -2.45
TRAPPC3O43617 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms