Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-653P-201ENST00000363074 106 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 RNU6-899P-201ENST00000363947 107 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 RNU6-801P-201ENST00000364087 105 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 SNORA1-201ENST00000384107 130 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 RNU2-14P-201ENST00000411053 191 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 AC108059.2-201ENST00000434626 151 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 MTATP6P26-201ENST00000445926 662 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 RNU6-138P-201ENST00000515952 107 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 RNU6-126P-201ENST00000516685 103 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 SNORD36C-201ENST00000516733 66 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 RNU7-110P-201ENST00000516891 62 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 RNU2-31P-201ENST00000516954 155 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 MIR3145-201ENST00000580727 82 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 AC108676.2-201ENST00000605225 163 ntBASIC-0.68□□□□□ -2.52
SGCEO43556 SNORD24-201ENST00000383884 75 ntBASIC-0.69□□□□□ -2.52
SGCEO43556 AL160004.2-201ENST00000432935 350 ntBASIC-0.69□□□□□ -2.52
SGCEO43556 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.69□□□□□ -2.52
SGCEO43556 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.69□□□□□ -2.52
SGCEO43556 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
SGCEO43556 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.69□□□□□ -2.52
SGCEO43556 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.69□□□□□ -2.52
SGCEO43556 MIR6507-201ENST00000613630 70 ntBASIC-0.69□□□□□ -2.52
SGCEO43556 MIR302B-201ENST00000362188 73 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 RNA5SP245-201ENST00000364239 121 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 RNA5SP205-201ENST00000364653 136 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 MT-TQ-201ENST00000387372 72 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.7□□□□□ -2.52
SGCEO43556 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 AL021707.8-201ENST00000609428 183 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 AC073869.9-201ENST00000641610 120 ntBASIC-0.7□□□□□ -2.52
SGCEO43556 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 RNY1P7-201ENST00000384743 110 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 RNU6-120P-201ENST00000516077 103 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 NAMPTP3-201ENST00000569273 224 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 MIR4636-201ENST00000582271 80 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 AL049861.1-201ENST00000603130 150 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 AC099654.14-201ENST00000638599 341 ntBASIC-0.71□□□□□ -2.52
SGCEO43556 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.72□□□□□ -2.52
SGCEO43556 MIR101-2-201ENST00000362195 79 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 RNY3P11-201ENST00000364153 102 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 SNORA26.6-201ENST00000391256 115 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 MIR1265-201ENST00000408444 86 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 SNORD77.4-201ENST00000516158 81 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 AC141846.1-201ENST00000568348 142 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 AL360085.1-201ENST00000604713 532 ntBASIC-0.72□□□□□ -2.52
SGCEO43556 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 SNORD114-14-201ENST00000362723 75 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 RNU6-21P-201ENST00000384710 107 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 MTATP6P17-201ENST00000431030 672 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 SNORA25.16-201ENST00000516741 121 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 RNU6-365P-201ENST00000517113 106 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 AC100767.1-201ENST00000528178 123 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 AC084368.1-201ENST00000620935 65 ntBASIC-0.73□□□□□ -2.53
SGCEO43556 RNU6-888P-201ENST00000363010 101 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 SNORA63.5-201ENST00000363548 123 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 RNU6-597P-201ENST00000365620 102 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 MIR548A2-201ENST00000384956 97 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 RNU6-308P-201ENST00000390957 107 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 MTND1P29-201ENST00000448112 647 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 RNU7-161P-201ENST00000517289 62 ntBASIC-0.74□□□□□ -2.53
SGCEO43556 MIR342-201ENST00000362212 99 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 RNU6-949P-201ENST00000384040 107 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 SNORD61-201ENST00000384252 73 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
SGCEO43556 SNORD41.1-201ENST00000391000 69 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 AC099799.1-201ENST00000439809 192 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 SPINT5P-201ENST00000448174 155 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 AC244505.6-201ENST00000452829 130 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.75□□□□□ -2.53
SGCEO43556 SCARNA17-201ENST00000516183 144 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 IGKV1-22-201ENST00000524313 326 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 VN1R91P-201ENST00000594377 169 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 AC138305.3-201ENST00000624988 240 ntBASIC-0.75□□□□□ -2.53
SGCEO43556 RNU4-80P-201ENST00000363200 141 ntBASIC-0.76□□□□□ -2.53
SGCEO43556 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.76□□□□□ -2.53
SGCEO43556 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.76□□□□□ -2.53
SGCEO43556 SNORD63-201ENST00000384262 68 ntBASIC-0.76□□□□□ -2.53
SGCEO43556 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.76□□□□□ -2.53
SGCEO43556 SNORD83B-201ENST00000386745 93 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 264.7 ms