Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.57□□□□□ -2.32
RIPK2O43353 MIR377-201ENST00000362145 69 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 Y_RNA.23-201ENST00000362496 106 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 Y_RNA.292-201ENST00000364904 97 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 RNU6-580P-201ENST00000365159 107 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 SNORA27-201ENST00000384323 126 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 RNU6-205P-201ENST00000390858 107 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 SNORA26-201ENST00000391286 122 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 RNU2-70P-201ENST00000410718 179 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 RNU7-67P-201ENST00000459003 62 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 RNU6-1132P-201ENST00000459214 107 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 snoU13.21-201ENST00000459368 105 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 AC107297.1-201ENST00000459991 176 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 MTND1P19-201ENST00000511780 315 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 RNU6-958P-201ENST00000516995 106 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 CYP3A137P-201ENST00000562436 69 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 RMST_2.1-201ENST00000617263 136 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 MIR376A2-201ENST00000636782 80 ntBASIC0.56□□□□□ -2.32
RIPK2O43353 RNU6-369P-201ENST00000362515 102 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 Y_RNA.162-201ENST00000363683 102 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 Y_RNA.199-201ENST00000364014 102 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 Y_RNA.262-201ENST00000364641 102 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 SNORA1-201ENST00000384107 130 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 Y_RNA.539-201ENST00000384635 107 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 MIR1827-201ENST00000408549 66 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 MIR548H3-201ENST00000408771 118 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 RNU6-994P-201ENST00000410507 111 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.55□□□□□ -2.32
RIPK2O43353 AC244023.1-201ENST00000426884 112 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 AC067940.1-201ENST00000458411 300 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 RNU7-73P-201ENST00000458743 63 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 RPS29P24-201ENST00000486345 171 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 RNY3P16-201ENST00000516338 101 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 Z83818.1-201ENST00000603584 150 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 AC242498.1-201ENST00000604134 111 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 uc_338.6-201ENST00000613544 171 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.55□□□□□ -2.32
RIPK2O43353 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
RIPK2O43353 Y_RNA.440-201ENST00000384120 114 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 SNORD77.3-201ENST00000391113 65 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 RNU6-1190P-201ENST00000410811 104 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 HMGN1P33-201ENST00000432945 451 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.54□□□□□ -2.32
RIPK2O43353 AL138752.1-201ENST00000452964 351 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 Y_RNA.680-201ENST00000516441 93 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 MIR5000-201ENST00000577717 103 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 MIR4264-201ENST00000583520 66 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 MIR8055-201ENST00000610739 97 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 7SK.10-201ENST00000621414 298 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 Z97988.1-201ENST00000637697 135 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 AC099654.10-201ENST00000640395 161 ntBASIC0.54□□□□□ -2.32
RIPK2O43353 SNORD27-201ENST00000363981 72 ntBASIC0.53□□□□□ -2.32
RIPK2O43353 RNY4P28-201ENST00000365281 93 ntBASIC0.53□□□□□ -2.32
RIPK2O43353 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
RIPK2O43353 Y_RNA.477-201ENST00000384352 108 ntBASIC0.53□□□□□ -2.32
RIPK2O43353 SNORD58.1-201ENST00000391313 66 ntBASIC0.53□□□□□ -2.32
RIPK2O43353 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.53□□□□□ -2.32
RIPK2O43353 RNU6-998P-201ENST00000515894 101 ntBASIC0.53□□□□□ -2.32
RIPK2O43353 RNU6-1045P-201ENST00000516321 107 ntBASIC0.53□□□□□ -2.32
RIPK2O43353 MIR4719-201ENST00000585233 84 ntBASIC0.53□□□□□ -2.32
RIPK2O43353 AP000753.3-201ENST00000604083 169 ntBASIC0.53□□□□□ -2.32
RIPK2O43353 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
RIPK2O43353 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
RIPK2O43353 Y_RNA.20-201ENST00000362479 113 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 Y_RNA.308-201ENST00000365043 101 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 RNU6-1189P-201ENST00000383958 107 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 Y_RNA.410-201ENST00000383992 113 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 Y_RNA.556-201ENST00000384677 113 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
RIPK2O43353 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 RNU4-43P-201ENST00000410628 137 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 AC015818.7-201ENST00000428754 109 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 AC087499.7-201ENST00000441958 109 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 RNU2-11P-201ENST00000459191 187 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 RNU7-96P-201ENST00000459535 64 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 RNU7-53P-201ENST00000516705 60 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 MIR6740-201ENST00000618268 113 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 MIR6515-201ENST00000619843 57 ntBASIC0.52□□□□□ -2.33
RIPK2O43353 RNU6-103P-201ENST00000363686 107 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 RNU6-728P-201ENST00000365375 104 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 Y_RNA.350-201ENST00000365409 98 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 RNU6-493P-201ENST00000391321 108 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 MIR548I3-201ENST00000408378 149 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 SNORD83.1-201ENST00000411362 77 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 MTND3P2-201ENST00000438452 342 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 AL118496.2-201ENST00000448300 230 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 RNU7-62P-201ENST00000458856 62 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.51□□□□□ -2.33
RIPK2O43353 MIR4308-201ENST00000580634 81 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 MIR3129-201ENST00000581095 76 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 MIR5197-201ENST00000583721 112 ntBASIC0.51□□□□□ -2.33
RIPK2O43353 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
RIPK2O43353 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.5□□□□□ -2.33
RIPK2O43353 Y_RNA.7-201ENST00000362352 102 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 Y_RNA.60-201ENST00000362831 98 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms