Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MIR643-201ENST00000385267 97 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 RNU6-130P-201ENST00000411112 103 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.18□□□□□ -2.44
CLOCKO15516 AC098614.3-201ENST00000438957 440 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 MRPS35P2-201ENST00000508242 191 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 MTCO2P24-201ENST00000515611 426 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 MIR5692C2-201ENST00000577959 77 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 PART1_1.1-201ENST00000611761 217 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 AP001282.2-201ENST00000616149 309 ntBASIC-0.18□□□□□ -2.44
CLOCKO15516 SNORD113-8-201ENST00000363497 74 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 MIR760-201ENST00000390220 80 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 SUMO1P3-201ENST00000439961 304 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 RNU7-129P-201ENST00000516128 62 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 RNU6-504P-201ENST00000516568 104 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 U6atac.1-201ENST00000616025 117 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 MIR6717-201ENST00000622747 73 ntBASIC-0.19□□□□□ -2.44
CLOCKO15516 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 MIR593-201ENST00000384856 100 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 SNORA26-201ENST00000391286 122 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 RNA5SP261-201ENST00000410536 106 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 SNORA31.14-201ENST00000516728 116 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 RNA5SP47-201ENST00000517230 109 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 AC040926.1-201ENST00000530195 238 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.2□□□□□ -2.44
CLOCKO15516 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.2□□□□□ -2.44
CLOCKO15516 MIR6082-201ENST00000613604 109 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.2□□□□□ -2.44
CLOCKO15516 AC091304.10-201ENST00000641554 121 ntBASIC-0.2□□□□□ -2.44
CLOCKO15516 RNU6-403P-201ENST00000363163 104 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 RNA5SP128-201ENST00000365305 116 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 RNU6-756P-201ENST00000383997 107 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 SNORA26.6-201ENST00000391256 115 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 RNA5SP237-201ENST00000410414 113 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 AF228730.3-201ENST00000436691 102 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 AP003733.2-201ENST00000529409 171 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 MIR4802-201ENST00000581881 80 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 MIR4743-201ENST00000584576 69 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 AL662814.1-201ENST00000617364 121 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 MIR1302-1-201ENST00000637932 143 ntBASIC-0.21□□□□□ -2.44
CLOCKO15516 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
CLOCKO15516 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 RNU6-35P-201ENST00000384530 107 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 HSPE1P25-201ENST00000455484 251 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 RNU6-397P-201ENST00000516226 104 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 RNU6-765P-201ENST00000516916 99 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 RNU1-29P-201ENST00000606574 126 ntBASIC-0.22□□□□□ -2.44
CLOCKO15516 MIR302B-201ENST00000362188 73 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 RNU6-653P-201ENST00000363074 106 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 RNU6-929P-201ENST00000384429 107 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 U8.15-201ENST00000390947 134 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 RNU6-976P-201ENST00000516086 111 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 MIR5688-201ENST00000580619 83 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 MIR499B-201ENST00000636498 73 ntBASIC-0.23□□□□□ -2.45
CLOCKO15516 MIR342-201ENST00000362212 99 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 RNU4-90P-201ENST00000362773 141 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 RNU6-514P-201ENST00000384208 107 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 RNU6-102P-201ENST00000384485 104 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 SNORD28-201ENST00000384706 75 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 MIR526A2-201ENST00000390198 65 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
CLOCKO15516 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 AC096949.1-201ENST00000412047 152 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 RNU6-475P-201ENST00000516073 104 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 RNU6-782P-201ENST00000516852 104 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 MIR4752-201ENST00000579672 72 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 MIR4636-201ENST00000582271 80 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 MIR4639-201ENST00000584938 69 ntBASIC-0.24□□□□□ -2.45
CLOCKO15516 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.25□□□□□ -2.45
CLOCKO15516 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.25□□□□□ -2.45
CLOCKO15516 RNU6-291P-201ENST00000384720 107 ntBASIC-0.25□□□□□ -2.45
CLOCKO15516 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
CLOCKO15516 AC138393.2-201ENST00000414742 246 ntBASIC-0.25□□□□□ -2.45
CLOCKO15516 PMCHL1-202ENST00000423102 261 ntBASIC-0.25□□□□□ -2.45
CLOCKO15516 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.25□□□□□ -2.45
CLOCKO15516 RPL39P34-201ENST00000477141 156 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms