Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 SNORD115-18-201ENST00000363293 82 ntBASIC2.08□□□□□ -2.08
SHOXO15266 RNA5SP48-201ENST00000363969 126 ntBASIC2.08□□□□□ -2.08
SHOXO15266 SNORD115-17-201ENST00000364612 82 ntBASIC2.08□□□□□ -2.08
SHOXO15266 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
SHOXO15266 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SHOXO15266 RNA5SP89-201ENST00000410300 108 ntBASIC2.08□□□□□ -2.08
SHOXO15266 RNA5SP184-201ENST00000411071 108 ntBASIC2.08□□□□□ -2.08
SHOXO15266 AC234781.5-201ENST00000508429 271 ntBASIC2.08□□□□□ -2.08
SHOXO15266 SNORD111.1-201ENST00000516421 86 ntBASIC2.08□□□□□ -2.08
SHOXO15266 GTF3AP2-201ENST00000557014 266 ntBASIC2.08□□□□□ -2.08
SHOXO15266 CYP3A52P-201ENST00000563326 91 ntBASIC2.08□□□□□ -2.08
SHOXO15266 AL513534.2-201ENST00000603836 250 ntBASIC2.08□□□□□ -2.08
SHOXO15266 AC095038.3-201ENST00000634439 195 ntBASIC2.08□□□□□ -2.08
SHOXO15266 Y_RNA.171-201ENST00000363760 102 ntBASIC2.07□□□□□ -2.08
SHOXO15266 RNU6-439P-201ENST00000384188 106 ntBASIC2.07□□□□□ -2.08
SHOXO15266 MIR504-201ENST00000385065 83 ntBASIC2.07□□□□□ -2.08
SHOXO15266 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
SHOXO15266 RNA5SP356-201ENST00000515972 94 ntBASIC2.07□□□□□ -2.08
SHOXO15266 RNU6-537P-201ENST00000517277 103 ntBASIC2.07□□□□□ -2.08
SHOXO15266 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.07□□□□□ -2.08
SHOXO15266 MIR4251-201ENST00000635819 61 ntBASIC2.07□□□□□ -2.08
SHOXO15266 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SHOXO15266 Y_RNA.328-201ENST00000365208 113 ntBASIC2.06□□□□□ -2.08
SHOXO15266 Y_RNA.544-201ENST00000384650 113 ntBASIC2.06□□□□□ -2.08
SHOXO15266 MIR196B-201ENST00000384852 84 ntBASIC2.06□□□□□ -2.08
SHOXO15266 RNU6-816P-201ENST00000390914 107 ntBASIC2.06□□□□□ -2.08
SHOXO15266 RNU6-1268P-201ENST00000391214 107 ntBASIC2.06□□□□□ -2.08
SHOXO15266 RNU6-1239P-201ENST00000391310 107 ntBASIC2.06□□□□□ -2.08
SHOXO15266 RNU6-1190P-201ENST00000410811 104 ntBASIC2.06□□□□□ -2.08
SHOXO15266 AL513328.1-201ENST00000446460 224 ntBASIC2.06□□□□□ -2.08
SHOXO15266 SNORD109B-201ENST00000458961 67 ntBASIC2.06□□□□□ -2.08
SHOXO15266 SNORD109A-201ENST00000459128 67 ntBASIC2.06□□□□□ -2.08
SHOXO15266 SNORA44.1-201ENST00000517031 108 ntBASIC2.06□□□□□ -2.08
SHOXO15266 MIR4299-201ENST00000577899 72 ntBASIC2.06□□□□□ -2.08
SHOXO15266 FAM71BP1-201ENST00000604431 523 ntBASIC2.06□□□□□ -2.08
SHOXO15266 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
SHOXO15266 MIR7843-201ENST00000622274 79 ntBASIC2.06□□□□□ -2.08
SHOXO15266 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHOXO15266 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHOXO15266 WWP1P1-201ENST00000466609 2769 ntBASIC2.05□□□□□ -2.08
SHOXO15266 RN7SKP132-201ENST00000516001 208 ntBASIC2.05□□□□□ -2.08
SHOXO15266 RNA5SP282-201ENST00000516355 108 ntBASIC2.05□□□□□ -2.08
SHOXO15266 Y_RNA.677-201ENST00000516401 85 ntBASIC2.05□□□□□ -2.08
SHOXO15266 Y_RNA.694-201ENST00000516677 117 ntBASIC2.05□□□□□ -2.08
SHOXO15266 RNA5SP170-201ENST00000517150 101 ntBASIC2.05□□□□□ -2.08
SHOXO15266 MIR4524B-201ENST00000581569 115 ntBASIC2.05□□□□□ -2.08
SHOXO15266 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
SHOXO15266 MIR8055-201ENST00000610739 97 ntBASIC2.05□□□□□ -2.08
SHOXO15266 AC087741.2-201ENST00000619415 172 ntBASIC2.05□□□□□ -2.08
SHOXO15266 Z97988.1-201ENST00000637697 135 ntBASIC2.05□□□□□ -2.08
SHOXO15266 Y_RNA.78-201ENST00000362970 110 ntBASIC2.04□□□□□ -2.08
SHOXO15266 RNA5SP68-201ENST00000363885 119 ntBASIC2.04□□□□□ -2.08
SHOXO15266 RNA5SP138-201ENST00000365098 114 ntBASIC2.04□□□□□ -2.08
SHOXO15266 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
SHOXO15266 MIR548AE2-201ENST00000583456 67 ntBASIC2.04□□□□□ -2.08
SHOXO15266 MIR21-201ENST00000362134 72 ntBASIC2.03□□□□□ -2.08
SHOXO15266 RNU4-82P-201ENST00000362443 140 ntBASIC2.03□□□□□ -2.08
SHOXO15266 SNORA70B-201ENST00000384210 135 ntBASIC2.03□□□□□ -2.08
SHOXO15266 HMGN1P33-201ENST00000432945 451 ntBASIC2.03□□□□□ -2.08
SHOXO15266 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.03□□□□□ -2.08
SHOXO15266 RNU6-922P-201ENST00000516753 99 ntBASIC2.03□□□□□ -2.08
SHOXO15266 RNU6-1258P-201ENST00000516911 111 ntBASIC2.03□□□□□ -2.08
SHOXO15266 AC015688.6-201ENST00000577737 104 ntBASIC2.03□□□□□ -2.08
SHOXO15266 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.03□□□□□ -2.08
SHOXO15266 U4.3-201ENST00000621047 82 ntBASIC2.03□□□□□ -2.08
SHOXO15266 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SHOXO15266 Y_RNA.155-201ENST00000363632 101 ntBASIC2.02□□□□□ -2.09
SHOXO15266 RNU4-36P-201ENST00000364294 144 ntBASIC2.02□□□□□ -2.09
SHOXO15266 RNU6-409P-201ENST00000384114 104 ntBASIC2.02□□□□□ -2.09
SHOXO15266 Y_RNA.470-201ENST00000384307 117 ntBASIC2.02□□□□□ -2.09
SHOXO15266 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.02□□□□□ -2.09
SHOXO15266 RPL39P39-201ENST00000455840 151 ntBASIC2.02□□□□□ -2.09
SHOXO15266 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
SHOXO15266 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.02□□□□□ -2.09
SHOXO15266 SNORA77B-201ENST00000578179 125 ntBASIC2.02□□□□□ -2.09
SHOXO15266 MIR3618-201ENST00000580330 88 ntBASIC2.02□□□□□ -2.09
SHOXO15266 GHRLOS.1-201ENST00000610995 70 ntBASIC2.02□□□□□ -2.09
SHOXO15266 Y_RNA.818-201ENST00000618813 71 ntBASIC2.02□□□□□ -2.09
SHOXO15266 Y_RNA.10-201ENST00000362371 110 ntBASIC2.01□□□□□ -2.09
SHOXO15266 Y_RNA.43-201ENST00000362670 111 ntBASIC2.01□□□□□ -2.09
SHOXO15266 RNU4-67P-201ENST00000364569 141 ntBASIC2.01□□□□□ -2.09
SHOXO15266 SNORD38B-201ENST00000384690 67 ntBASIC2.01□□□□□ -2.09
SHOXO15266 AC141557.1-201ENST00000540982 400 ntBASIC2.01□□□□□ -2.09
SHOXO15266 AC064859.1-201ENST00000624741 174 ntBASIC2.01□□□□□ -2.09
SHOXO15266 SNORD38B-202ENST00000625943 69 ntBASIC2.01□□□□□ -2.09
SHOXO15266 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHOXO15266 SNORD33-201ENST00000362761 85 ntBASIC2□□□□□ -2.09
SHOXO15266 RNU6-363P-201ENST00000362895 105 ntBASIC2□□□□□ -2.09
SHOXO15266 RNA5SP456-201ENST00000364002 114 ntBASIC2□□□□□ -2.09
SHOXO15266 SNORD114-30-201ENST00000364448 72 ntBASIC2□□□□□ -2.09
SHOXO15266 MIR27B-201ENST00000385129 97 ntBASIC2□□□□□ -2.09
SHOXO15266 SNORD41-201ENST00000386967 70 ntBASIC2□□□□□ -2.09
SHOXO15266 RNU6-733P-201ENST00000410759 104 ntBASIC2□□□□□ -2.09
SHOXO15266 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2□□□□□ -2.09
SHOXO15266 AC245047.7-201ENST00000440265 293 ntBASIC2□□□□□ -2.09
SHOXO15266 HSPE1P24-201ENST00000450782 238 ntBASIC2□□□□□ -2.09
SHOXO15266 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
SHOXO15266 RNU7-41P-201ENST00000515917 61 ntBASIC2□□□□□ -2.09
SHOXO15266 MIR548AO-201ENST00000579992 96 ntBASIC2□□□□□ -2.09
SHOXO15266 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms