Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 RNU6-811P-201ENST00000384069 107 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 MIR7-2-201ENST00000384970 110 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 MIR548L-201ENST00000408303 86 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 MTND1P34-201ENST00000438556 671 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.59□□□□□ -2.5
SDCBPO00560 RNU6-397P-201ENST00000516226 104 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 RNU6-191P-201ENST00000516295 94 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 AC022079.1-201ENST00000621546 602 ntBASIC-0.59□□□□□ -2.5
SDCBPO00560 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.59□□□□□ -2.5
SDCBPO00560 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 SNORD114-28-201ENST00000363610 72 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 SNORD114-11-201ENST00000363738 75 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 RNU6-144P-201ENST00000383951 107 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 AC244505.6-201ENST00000452829 130 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 MIR4662B-201ENST00000579498 81 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 MIR4645-201ENST00000583158 77 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 MIR6507-201ENST00000613630 70 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 AL162726.3-218ENST00000636401 95 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 MIR6841-201ENST00000637129 72 ntBASIC-0.6□□□□□ -2.51
SDCBPO00560 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
SDCBPO00560 MTND1P14-201ENST00000427400 950 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 RNU7-104P-201ENST00000459398 79 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 MTCO2P24-201ENST00000515611 426 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 RNA5SP285-201ENST00000516619 119 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 MIR3688-2-201ENST00000636963 87 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 MIR6759-201ENST00000638110 65 ntBASIC-0.61□□□□□ -2.51
SDCBPO00560 MIR302B-201ENST00000362188 73 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 RNA5SP403-201ENST00000363598 108 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 RNA5SP205-201ENST00000364653 136 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 SNORA18-201ENST00000384416 132 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 MIR559-201ENST00000385188 96 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 SNORD41.1-201ENST00000391000 69 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 RNU6-370P-201ENST00000411008 104 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 RNU6-764P-201ENST00000516396 105 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.62□□□□□ -2.51
SDCBPO00560 AL360085.1-201ENST00000604713 532 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 AL590491.3-201ENST00000610731 82 ntBASIC-0.62□□□□□ -2.51
SDCBPO00560 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 RNU6-923P-201ENST00000364753 107 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 SNORD63-201ENST00000384262 68 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 RNU6-21P-201ENST00000384710 107 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 RNU6-284P-201ENST00000411105 106 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 BX276092.1-201ENST00000427368 251 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 RNU6-365P-201ENST00000517113 106 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 DEFB131E-201ENST00000532329 154 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 VN1R91P-201ENST00000594377 169 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 AC013791.1-201ENST00000616619 62 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 AC084368.1-201ENST00000620935 65 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 AC073869.9-201ENST00000641610 120 ntBASIC-0.63□□□□□ -2.51
SDCBPO00560 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.64□□□□□ -2.51
SDCBPO00560 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.64□□□□□ -2.51
SDCBPO00560 RNA5SP261-201ENST00000410536 106 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 MTATP6P17-201ENST00000431030 672 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 MRPS35P2-201ENST00000508242 191 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.64□□□□□ -2.51
SDCBPO00560 RNU7-30P-201ENST00000516835 62 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 AP003733.2-201ENST00000529409 171 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 MIR8064-201ENST00000612863 90 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 RN7SL660P-201ENST00000614852 299 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 AC091932.4-201ENST00000623386 200 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 AP000770.2-201ENST00000623694 100 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 MIR4272-201ENST00000635924 64 ntBASIC-0.64□□□□□ -2.51
SDCBPO00560 SNORA22.1-201ENST00000362701 134 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 RNA5SP133-201ENST00000363368 119 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 RNU6-865P-201ENST00000364772 107 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 RNY3-201ENST00000365484 102 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 MIR516B1-201ENST00000385211 90 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 SNORD110-201ENST00000408189 75 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 RNA5SP484-201ENST00000458857 111 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 NAMPTP3-201ENST00000569273 224 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 FTX_2.1-201ENST00000618816 94 ntBASIC-0.65□□□□□ -2.51
SDCBPO00560 MTND5P32-201ENST00000560711 1802 ntBASIC-0.66□□□□□ -2.51
SDCBPO00560 MIR367-201ENST00000362299 68 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 RNU4-58P-201ENST00000363192 141 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 RNU4-10P-201ENST00000364383 140 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 U8.6-201ENST00000364939 135 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms