Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNU7-113P-201ENST00000459273 62 ntBASIC2.35□□□□□ -2.03
RFXAPO00287 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.35□□□□□ -2.03
RFXAPO00287 MIR4778-201ENST00000577635 80 ntBASIC2.35□□□□□ -2.03
RFXAPO00287 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.35□□□□□ -2.03
RFXAPO00287 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.34□□□□□ -2.03
RFXAPO00287 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 Y_RNA.191-201ENST00000363972 113 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 RNU6-461P-201ENST00000364195 107 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 SNORA32-201ENST00000384072 121 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 Y_RNA.437-201ENST00000384113 113 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 SNORD38C-201ENST00000384381 69 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 MIR515-2-201ENST00000384883 83 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 MIR515-1-201ENST00000384884 83 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 MIR516B2-201ENST00000385190 85 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 RNU6-279P-201ENST00000391297 101 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 AC015922.2-201ENST00000435593 184 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 RNU6-857P-201ENST00000515893 110 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 MIR6841-201ENST00000637129 72 ntBASIC2.34□□□□□ -2.03
RFXAPO00287 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RFXAPO00287 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-34-201ENST00000362441 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-12-201ENST00000362583 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-29-201ENST00000362834 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-9-201ENST00000362912 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-21-201ENST00000362963 81 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-14-201ENST00000363090 81 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 RNU6-23P-201ENST00000363283 107 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-41-201ENST00000363608 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-11-201ENST00000363616 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-5-201ENST00000363633 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-39-201ENST00000363694 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-4-201ENST00000363810 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-6-201ENST00000363942 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-42-201ENST00000364273 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-15-201ENST00000364809 81 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-26-201ENST00000365067 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-10-201ENST00000365073 81 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-43-201ENST00000365503 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORD115-36-201ENST00000365629 82 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORA18-201ENST00000384416 132 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 SNORA26.6-201ENST00000391256 115 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 Y_RNA.620-201ENST00000411009 88 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 MIR4668-201ENST00000582284 70 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 MIR376B-201ENST00000614515 100 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 AL442644.1-201ENST00000454390 3105 ntBASIC2.33□□□□□ -2.04
RFXAPO00287 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RFXAPO00287 SNORA22.1-201ENST00000362701 134 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 SNORD45B-201ENST00000364617 72 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 Y_RNA.377-201ENST00000365644 108 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RFXAPO00287 SNORA40.18-201ENST00000391200 128 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 RNU6-887P-201ENST00000410660 100 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 AC245517.4-201ENST00000448601 281 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.32□□□□□ -2.04
RFXAPO00287 RNU7-34P-201ENST00000459394 64 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 AL049779.4-201ENST00000604500 156 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 SEPT14P17-201ENST00000617978 177 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 MIR6766-201ENST00000622641 72 ntBASIC2.32□□□□□ -2.04
RFXAPO00287 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 SNORD116-22-201ENST00000384430 92 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 RNY1P4-201ENST00000384595 115 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 MIR1267-201ENST00000408723 78 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 RNU7-171P-201ENST00000459581 62 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 UBL5P1-201ENST00000507979 193 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 RNA5SP33-201ENST00000516687 98 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 Y_RNA.705-201ENST00000516862 110 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.31□□□□□ -2.04
RFXAPO00287 MIR4666B-201ENST00000578142 81 ntBASIC2.31□□□□□ -2.04
RFXAPO00287 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 RNU6-913P-201ENST00000390913 95 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 SNORD28B-201ENST00000390993 75 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 RNU2-40P-201ENST00000410833 196 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.3□□□□□ -2.04
RFXAPO00287 AC093850.1-201ENST00000454121 251 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 SNORA31.11-201ENST00000516528 139 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 RNU7-28P-201ENST00000516759 62 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 MIR4791-201ENST00000607666 84 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 AC006160.2-201ENST00000637708 154 ntBASIC2.3□□□□□ -2.04
RFXAPO00287 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFXAPO00287 SNORD115-2-201ENST00000362842 82 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 SNORD115-20-201ENST00000365099 82 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 RNU1-138P-201ENST00000384093 164 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 RNU6-424P-201ENST00000384367 105 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 MIR583-201ENST00000384846 75 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 AC090844.1-201ENST00000422019 156 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 HMGN1P33-201ENST00000432945 451 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 RNA5SP168-201ENST00000516642 112 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 snoU13.31-201ENST00000607291 104 ntBASIC2.29□□□□□ -2.04
RFXAPO00287 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
RFXAPO00287 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RFXAPO00287 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RFXAPO00287 RNU6-1313P-201ENST00000362622 102 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 RNU6-1319P-201ENST00000390855 104 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 RNU6-747P-201ENST00000390928 104 ntBASIC2.28□□□□□ -2.04
RFXAPO00287 U8.15-201ENST00000390947 134 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms