Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 Y_RNA.91-201ENST00000363042 107 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 RNU6-1309P-201ENST00000363305 108 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 RNU6-1189P-201ENST00000383958 107 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 MIR548A2-201ENST00000384956 97 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 MT-TT-201ENST00000387460 66 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 RNU6-913P-201ENST00000390913 95 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 MIR936-201ENST00000401264 98 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 AL606845.1-201ENST00000404881 255 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 MIR548I3-201ENST00000408378 149 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 HMGN1P33-201ENST00000432945 451 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 MIR924-201ENST00000638017 53 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
CCDC188H7C350 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC188H7C350 Y_RNA.54-201ENST00000362766 105 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 SNORA63-201ENST00000363450 132 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 SNORD114-23-201ENST00000363536 72 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 Y_RNA.634-201ENST00000364811 113 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 RNY3P5-201ENST00000384127 102 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 RNU2-55P-201ENST00000411146 174 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 RPL39P25-201ENST00000449384 154 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 RNU7-96P-201ENST00000459535 64 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 Y_RNA.720-201ENST00000517166 92 ntBASIC0.61□□□□□ -2.31
CCDC188H7C350 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
CCDC188H7C350 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
CCDC188H7C350 RNU6-938P-201ENST00000411285 103 ntBASIC0.6□□□□□ -2.31
CCDC188H7C350 Y_RNA.304-201ENST00000365011 112 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 RNU6-580P-201ENST00000365159 107 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 RNU4-17P-201ENST00000365598 141 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 Y_RNA.410-201ENST00000383992 113 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 RNU6-364P-201ENST00000384387 107 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 MIR573-201ENST00000384964 99 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 MIR616-201ENST00000385293 97 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 SNORD77.3-201ENST00000391113 65 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 MIR1257-201ENST00000408490 117 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 AF228730.3-201ENST00000436691 102 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC188H7C350 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 Y_RNA.681-201ENST00000516445 113 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 RNA5SP153-201ENST00000516498 76 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 MIR4676-201ENST00000583078 72 ntBASIC0.59□□□□□ -2.31
CCDC188H7C350 AL589743.1-201ENST00000551932 2712 ntBASIC0.59□□□□□ -2.32
CCDC188H7C350 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.32
CCDC188H7C350 Y_RNA.30-201ENST00000362572 97 ntBASIC0.58□□□□□ -2.32
CCDC188H7C350 Y_RNA.66-201ENST00000362862 102 ntBASIC0.58□□□□□ -2.32
CCDC188H7C350 RNU6-484P-201ENST00000384016 107 ntBASIC0.58□□□□□ -2.32
CCDC188H7C350 MIR588-201ENST00000384900 83 ntBASIC0.58□□□□□ -2.32
CCDC188H7C350 RNU6-651P-201ENST00000411040 105 ntBASIC0.58□□□□□ -2.32
CCDC188H7C350 RNU6-998P-201ENST00000515894 101 ntBASIC0.58□□□□□ -2.32
CCDC188H7C350 Z97988.1-201ENST00000637697 135 ntBASIC0.58□□□□□ -2.32
CCDC188H7C350 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CCDC188H7C350 MIR335-201ENST00000362173 94 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.82-201ENST00000363000 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.92-201ENST00000363043 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.235-201ENST00000364412 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.251-201ENST00000364551 99 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.306-201ENST00000365015 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.312-201ENST00000365089 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.322-201ENST00000365151 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.483-201ENST00000384380 101 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 RNU6-1228P-201ENST00000391014 107 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 AC244023.1-201ENST00000426884 112 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 SNORD2.1-201ENST00000458762 69 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.650-201ENST00000459002 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 RNU6-453P-201ENST00000516819 85 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 RNU7-70P-201ENST00000516941 66 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.777-201ENST00000516982 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.771-201ENST00000598668 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 AC242498.1-201ENST00000604134 111 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 MIR6740-201ENST00000618268 113 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 MIR8062-201ENST00000621515 85 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.789-201ENST00000622480 102 ntBASIC0.57□□□□□ -2.32
CCDC188H7C350 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC188H7C350 Y_RNA.176-201ENST00000363815 109 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 snoU2_19.4-201ENST00000364329 80 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 RNU6-728P-201ENST00000365375 104 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 Y_RNA.574-201ENST00000384766 95 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 MIR140-201ENST00000385282 100 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CCDC188H7C350 MIR938-201ENST00000401216 83 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 RNU6-1165P-201ENST00000410119 107 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 AL442663.2-201ENST00000554385 511 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 MIR4804-201ENST00000581683 73 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 AL162730.1-201ENST00000605734 292 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 AL365265.1-201ENST00000621045 234 ntBASIC0.56□□□□□ -2.32
CCDC188H7C350 Y_RNA.115-201ENST00000363272 98 ntBASIC0.55□□□□□ -2.32
CCDC188H7C350 Y_RNA.262-201ENST00000364641 102 ntBASIC0.55□□□□□ -2.32
CCDC188H7C350 Y_RNA.351-201ENST00000365436 96 ntBASIC0.55□□□□□ -2.32
CCDC188H7C350 RNY1P8-201ENST00000383970 114 ntBASIC0.55□□□□□ -2.32
CCDC188H7C350 RNU6-1160P-201ENST00000384546 104 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms