| H3BNC9 | FANCD2-213 | ENST00000625535 | 117 nt | TSL 5 BASIC | 1.87 | □□□□□ -2.11 | | |
| H3BNC9 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | CEP57L1-213 | ENST00000520883 | 2055 nt | TSL 5 BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-766P-201 | ENST00000362478 | 107 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | Y_RNA.163-201 | ENST00000363702 | 113 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-1014P-201 | ENST00000383940 | 103 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-756P-201 | ENST00000383997 | 107 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-163P-201 | ENST00000384396 | 106 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | RNY1P7-201 | ENST00000384743 | 110 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | MIR489-201 | ENST00000384923 | 84 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-938P-201 | ENST00000411285 | 103 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | SNRPGP14-201 | ENST00000435400 | 219 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | SNORD45.4-201 | ENST00000516629 | 73 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-349P-201 | ENST00000362402 | 107 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | SNORA63.5-201 | ENST00000363548 | 123 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | SNORD14E-201 | ENST00000364009 | 85 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | SNORA16.1-201 | ENST00000364597 | 132 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | snoU2-30.1-201 | ENST00000365012 | 70 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | SNORD24-201 | ENST00000383884 | 75 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | MIR570-201 | ENST00000384917 | 97 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | TRAJ39-201 | ENST00000390498 | 63 nt | APPRIS P1 BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | RNU2-40P-201 | ENST00000410833 | 196 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | AC008834.1-201 | ENST00000511612 | 175 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | SNORA31.4-201 | ENST00000516049 | 129 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-126P-201 | ENST00000516685 | 103 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-1116P-201 | ENST00000517269 | 99 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | AC022523.2-201 | ENST00000561045 | 150 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | MIR4709-201 | ENST00000577272 | 72 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | AC087685.1-201 | ENST00000587507 | 141 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | HSPE1P19-201 | ENST00000603327 | 295 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | AL596211.1-201 | ENST00000569873 | 2277 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| H3BNC9 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | ZNF260-205 | ENST00000593142 | 4047 nt | APPRIS P1 TSL 1 (best) BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | Y_RNA.242-201 | ENST00000364473 | 110 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-294P-201 | ENST00000364999 | 102 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | SNORA51.5-201 | ENST00000384126 | 131 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | RNU6-1031P-201 | ENST00000384773 | 107 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | MIR590-201 | ENST00000385008 | 97 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | RNY4P29-201 | ENST00000410801 | 97 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | RPL39P34-201 | ENST00000477141 | 156 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | COX6CP6-201 | ENST00000490840 | 228 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | SNORD36C-201 | ENST00000516733 | 66 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | MIR3935-201 | ENST00000583472 | 104 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | MIR5197-201 | ENST00000583721 | 112 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | MIR4762-201 | ENST00000585261 | 75 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| H3BNC9 | CHST9-202 | ENST00000581714 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 1.84 | □□□□□ -2.12 | | |
| H3BNC9 | U8.5-201 | ENST00000364528 | 136 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | Y_RNA.323-201 | ENST00000365157 | 109 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | Y_RNA.344-201 | ENST00000365381 | 112 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | Y_RNA.362-201 | ENST00000365518 | 110 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | SUMO2P12-201 | ENST00000405924 | 140 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | RNA5SP136-201 | ENST00000410906 | 107 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | MTATP6P21-201 | ENST00000440681 | 189 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | SNRPGP13-201 | ENST00000442212 | 177 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | AC114811.1-201 | ENST00000507207 | 168 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | RNU7-25P-201 | ENST00000516544 | 62 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | RNY4P20-201 | ENST00000516678 | 93 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | AC090616.3-202 | ENST00000583346 | 205 nt | TSL 2 BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | MIR4448-201 | ENST00000584360 | 86 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-94P-201 | ENST00000607728 | 107 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | KIAA1107-201 | ENST00000370378 | 4622 nt | TSL 5 BASIC | 1.83 | □□□□□ -2.12 | | |
| H3BNC9 | KIAA1551-201 | ENST00000312561 | 6230 nt | APPRIS P1 TSL 1 (best) BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | Y_RNA.327-201 | ENST00000365201 | 102 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-442P-201 | ENST00000383968 | 104 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | AC004965.1-201 | ENST00000413033 | 213 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | JTBP1-201 | ENST00000441314 | 247 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | RPS26P48-201 | ENST00000491713 | 339 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | RNA5SP168-201 | ENST00000516642 | 112 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | AC024614.2-201 | ENST00000577584 | 372 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | AC062037.1-201 | ENST00000605302 | 128 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | ZBBX-205 | ENST00000455345 | 3185 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.82 | □□□□□ -2.12 | | |
| H3BNC9 | LINC01790-201 | ENST00000447194 | 2852 nt | TSL 2 BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-268P-201 | ENST00000364174 | 107 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-392P-201 | ENST00000364926 | 101 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | Y_RNA.547-201 | ENST00000384654 | 119 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | MIR934-201 | ENST00000401241 | 83 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | MIR548O-201 | ENST00000408583 | 114 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | MIR1302-4-201 | ENST00000408701 | 150 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | MIR1276-201 | ENST00000408707 | 83 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-412P-201 | ENST00000516434 | 106 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | AC007991.3-201 | ENST00000517623 | 502 nt | TSL 4 BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | CERS6-AS1-202 | ENST00000594898 | 499 nt | TSL 5 BASIC | 1.81 | □□□□□ -2.12 | | |
| H3BNC9 | MIRLET7C-201 | ENST00000362160 | 84 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | Y_RNA.198-201 | ENST00000364013 | 98 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-573P-201 | ENST00000383938 | 106 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-439P-201 | ENST00000384188 | 106 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-424P-201 | ENST00000384367 | 105 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | Y_RNA.494-201 | ENST00000384432 | 111 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-592P-201 | ENST00000411333 | 103 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | snoU13.9-201 | ENST00000458927 | 103 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | snoU13.18-201 | ENST00000459483 | 104 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | RNU2-35P-201 | ENST00000516446 | 142 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | RNU6-113P-201 | ENST00000516653 | 101 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | SUMO2P16-201 | ENST00000519475 | 264 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| H3BNC9 | MIR4419B-201 | ENST00000577260 | 68 nt | BASIC | 1.8 | □□□□□ -2.12 | | |