Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AC103810.7-201ENST00000607821 91 ntBASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR219B-201ENST00000637023 88 ntBASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORD116-10-201ENST00000363791 102 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORD58A-201ENST00000383875 65 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-220P-201ENST00000390919 107 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNA5SP109-201ENST00000391010 116 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNA5SP482-201ENST00000391269 118 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 Y_RNA.609-201ENST00000410669 89 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR1270-201ENST00000459320 83 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 snoU13.15-201ENST00000459407 104 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC023141.11-201ENST00000508864 202 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC007336.1-201ENST00000576365 3828 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-86P-201ENST00000606534 107 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AL353149.1-201ENST00000610667 244 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AL137847.3-201ENST00000611521 109 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR7157-201ENST00000635801 60 ntBASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AP006437.1-201ENST00000641440 3685 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-509P-201ENST00000363519 107 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 Y_RNA.247-201ENST00000364500 92 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORA1.1-201ENST00000364671 133 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORA64-201ENST00000384674 134 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR1267-201ENST00000408723 78 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU2-63P-201ENST00000410792 194 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU7-34P-201ENST00000459394 64 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORA48.11-201ENST00000517015 89 ntBASIC2.17□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORA22.1-201ENST00000362701 134 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-424P-201ENST00000384367 105 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR95-201ENST00000385072 81 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SRIP3-201ENST00000413200 219 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MICF-203ENST00000432679 129 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC108729.3-201ENST00000513484 108 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-1018P-201ENST00000516577 106 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC024995.1-201ENST00000523014 93 ntBASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORD115-34-201ENST00000362441 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-12-201ENST00000362583 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD114-1-201ENST00000362705 72 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-29-201ENST00000362834 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-9-201ENST00000362912 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-21-201ENST00000362963 81 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-14-201ENST00000363090 81 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-41-201ENST00000363608 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-11-201ENST00000363616 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-5-201ENST00000363633 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-39-201ENST00000363694 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-4-201ENST00000363810 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-6-201ENST00000363942 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-42-201ENST00000364273 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-15-201ENST00000364809 81 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-26-201ENST00000365067 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-10-201ENST00000365073 81 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Y_RNA.316-201ENST00000365118 111 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-43-201ENST00000365503 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-36-201ENST00000365629 82 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-788P-201ENST00000390967 104 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 AC090844.1-201ENST00000422019 156 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 CST2P1-201ENST00000425770 87 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORA31.11-201ENST00000516528 139 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-958P-201ENST00000516995 106 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-1313P-201ENST00000362622 102 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR515-2-201ENST00000384883 83 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR515-1-201ENST00000384884 83 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR504-201ENST00000385065 83 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR561-201ENST00000385216 97 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Y_RNA.607-201ENST00000410597 98 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-1190P-201ENST00000410811 104 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 AC015922.2-201ENST00000435593 184 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 AC018868.1-201ENST00000491307 315 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Y_RNA.94-201ENST00000363068 106 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Y_RNA.430-201ENST00000384081 110 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Y_RNA.565-201ENST00000384719 101 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR516B2-201ENST00000385190 85 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 239.3 ms