Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SEPT7P4-201ENST00000437076 306 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-365P-201ENST00000517113 106 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 AC036111.3-201ENST00000526389 112 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 MRPS18CP4-201ENST00000535821 231 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 AL078603.1-201ENST00000603824 313 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 AC242498.1-201ENST00000604134 111 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 MIR6788-201ENST00000618842 66 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-369P-201ENST00000362515 102 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-1082P-201ENST00000364574 107 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.297-201ENST00000364950 91 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.440-201ENST00000384120 114 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.797-201ENST00000515977 94 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 MIR151B-201ENST00000584249 96 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 AC090425.1-201ENST00000610007 140 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 SEPT14P17-201ENST00000617978 177 ntBASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRIM49D1C9J1S8 RNA5SP48-201ENST00000363969 126 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 RNU4-16P-201ENST00000364737 141 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-643P-201ENST00000384018 107 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 SNORA24-201ENST00000384096 131 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 SNORA27-201ENST00000384323 126 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 RNU4-70P-201ENST00000384579 139 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-768P-201ENST00000384683 107 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 AC023449.1-201ENST00000454464 154 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-861P-201ENST00000516745 106 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-34-201ENST00000362441 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-12-201ENST00000362583 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-29-201ENST00000362834 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-9-201ENST00000362912 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-21-201ENST00000362963 81 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-14-201ENST00000363090 81 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-13-201ENST00000363358 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-41-201ENST00000363608 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-11-201ENST00000363616 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-5-201ENST00000363633 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-39-201ENST00000363694 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-4-201ENST00000363810 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-682P-201ENST00000363843 106 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-16-201ENST00000363887 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-6-201ENST00000363942 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-42-201ENST00000364273 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-15-201ENST00000364809 81 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-275P-201ENST00000364910 107 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-1-201ENST00000364961 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-26-201ENST00000365067 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-10-201ENST00000365073 81 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-728P-201ENST00000365375 104 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-43-201ENST00000365503 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-36-201ENST00000365629 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.478-201ENST00000384358 107 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORA2B-201ENST00000384583 137 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 MIR19B1-201ENST00000384829 87 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD83.1-201ENST00000411362 77 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 RNU7-67P-201ENST00000459003 62 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 RNU2-11P-201ENST00000459191 187 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 RNA5SP220-201ENST00000516298 104 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-504P-201ENST00000516568 104 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORD115-40-201ENST00000606510 82 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 MIR6740-201ENST00000618268 113 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 AC134878.1-201ENST00000619901 243 ntBASIC0.7□□□□□ -2.3
TRIM49D1C9J1S8 SNORA80D-201ENST00000384488 135 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.537-201ENST00000384626 109 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 SNORD12C-201ENST00000386307 89 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 SNORA26.6-201ENST00000391256 115 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 RNU4-43P-201ENST00000410628 137 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 RPS29P24-201ENST00000486345 171 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 RNA5SP153-201ENST00000516498 76 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 SCARNA15-202ENST00000516881 127 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 CYP3A137P-201ENST00000562436 69 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 MIR4662B-201ENST00000579498 81 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 MIR5688-201ENST00000580619 83 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 MIR5197-201ENST00000583721 112 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-1020P-201ENST00000363684 107 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-103P-201ENST00000363686 107 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.233-201ENST00000364407 101 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNY3P5-201ENST00000384127 102 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-42P-201ENST00000384165 107 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 MIR548I3-201ENST00000408378 149 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-847P-201ENST00000411115 108 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-602P-201ENST00000411155 105 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU2-64P-201ENST00000411315 191 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 AL035398.1-201ENST00000430869 322 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.644-201ENST00000459006 113 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-998P-201ENST00000515894 101 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms